Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182147g00002 AGGAACACAAGTTGTTCATCAAAGAAAAAATATCCAACAGTAATAGAAGAGCTATGCCATCACTTTTCCTTTGATGATCTTAGAAACTCAACCAACAACTTTGACAAGAAACTACTAGTTGGAAAAGGACCCCTTTGTACGGTCTATAAAGGTTGTATCAAACACAATAATGCTTCTGCAGCTGACAACATGATCGCACTGAAGGTGATGACTCGGGACTCCATCCAAGCTTCCCTTGAATTCAAGAAGGAAATTGAGATGCTATGTCAGCTTCATCACCCTAACTTAATATCTCTTATAGGCTTCTGCCATCACCAAAAGGAAAAGATTGGTGTGTACGAGTACATGGCCAATGGATCACTCAGTGATTACTTGAGTAGTAGGAACAATGAACCACTATCATGGAACAAGAGACTAGACATCTGCATTGGAGTAGCAAGTGCTCTACACTACCTTCATTCAGGAGCCAAGCGTAGCATCTTTCATCGTGATGTAAATCCAAGTAATATTCTCTTGGACAAGAATATGAAGGCAAAGCTTTCGAATTTTAATATATCGTTGCAGGGAGCACTCTCTACATTGAAGCCAAAGGAGATTAAAGTAGATAAGATTGTAGGTACATCTGCATTGATGGCTCCTGAGTATGCTATGCATGGTATTGTTACTGATAAATGTGATGTTTACTCCTTTGGTATGGTTCTACTACACGTGGTGGGGCATAATAATGTGTTCCACTACCTGATTCAACATGAAGAGCACACTCTTGAGGAGACAATGGATCCAATTCTGAAAGGAAAGGTTGCAGCTGAGAGTTGGCAAGTATTTAGCAATGTAATGCAAAGTTGCTTGGAGTATGAAGCAGATGAAAGACCAACAATGGGTGAAGTAGAGGTATTGCTTGAGCATGCTCTCTCATTGCAGCAACAAGCTGATATTGCAAACAATGCTGCTCATTGTTATACCTTATCATCCACTACCCCTTGTTTGAATTGTCGAGAGCGCTATAGTGAGCATGCTTTAGGACTACAAGAGTCAAAAGGAAGCAAATGGCATTACTAG 1059 0.4032 RNTSCSSKKKYPTVIEELCHHFSFDDLRNSTNNFDKKLLVGKGPLCTVYKGCIKHNNASAADNMIALKVMTRDSIQASLEFKKEIEMLCQLHHPNLISLIGFCHHQKEKIGVYEYMANGSLSDYLSSRNNEPLSWNKRLDICIGVASALHYLHSGAKRSIFHRDVNPSNILLDKNMKAKLSNFNISLQGALSTLKPKEIKVDKIVGTSALMAPEYAMHGIVTDKCDVYSFGMVLLHVVGHNNVFHYLIQHEEHTLEETMDPILKGKVAAESWQVFSNVMQSCLEYEADERPTMGEVEVLLEHALSLQQQADIANNAAHCYTLSSTTPCLNCRERYSEHALGLQESKGSKWHY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182147g00002 352 Gene3D Transferase(Phosphotransferase) domain 1 116 324 - -
Stsc182147g00002 352 FunFam Receptor-like protein kinase ANXUR2 1 115 - -
Stsc182147g00002 352 PANTHER OS07G0166700 PROTEIN 19 307 IPR045272 GO:0004714|GO:0006468
Stsc182147g00002 352 Pfam Protein tyrosine and serine/threonine kinase 40 297 IPR001245 GO:0004672|GO:0006468
Stsc182147g00002 352 SUPERFAMILY Protein kinase-like (PK-like) 11 296 IPR011009 -
Stsc182147g00002 352 Gene3D Phosphorylase Kinase; domain 1 5 115 - -
Stsc182147g00002 352 ProSiteProfiles Protein kinase domain profile. 34 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182147g00002 Stsc-Chr182147 8387 9445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182147g00002 3 315 Receptor kinase-like Gene Family AT5G38990 36.667 2.84e-63 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc182147g00002 PK_Tyr_Ser-Thr 6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182147g00002 - - adu:107486243 459.914