Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182147g00001 ATGGAGAAGAAGGTGAATCATGATGAAACAGTGAAGGTGATAGAGCAATGTCAAGTAGGTCCTCCACCAGGTTCTATTCCTTCCCCAACCTCTATTTCCCTTTCTTTCTTTGATATTTCTTTCTTATGCACCCCTGTAACATGCAAACGCATTTTCTTCTATCAATTCCCTTACCCCAAACAACACTTGTTACAACAAGTGCTTCCAAATCTCAAACAATCACTCTCACTCACTCTTCAACACTTCTTCCCTTTCTCTTCTAAAATAGTATTCCCTCCAAAGCCACAAACTCCTCACATTCTCTACTCAGAAGGTGACACTCTCACTTTCATAGTTGCTGAGTCAACAACAGTGAATCTCCACAACCTCGTATCTGACACAACAAAAGATGTCACGTGCTTCCACCCTTTTGTCCCCATGTTACCTTCTTCACGTGTCTTAGAGGATGGAACCTTGTTGATACCTCCCATGGCTATTCAACTCACCATCTTCCCCAACTCTGGCTTCACCATATGCGTCAATTTCAGTCACGTGGTTGTAGACGGGAAGGGATTCCATCACTTCATGAAGTTTTGGGCCTCTCTTTGTGCCTCTAAACAAAATTCTGCTCCTCTGCCGTGCCATGATAGACACATGATTGAAGACCAAAATGGACTCAAACCTCTTATCTTACAAACAGTTTGGAATTCTCCAAGAGAAAGATTCATGAGCCTCGGCCATAATGCTCCCAGTGACAATGTTCGCCGCATGTTTGTGTTGATGCGTGACCATGTTGATAATTTGAAGAAATATGTGTCTACTGAGTGCCAAAGACAAGGTATAGGGACATTTCATTTGTCAACCTTTGTTGTCACATGTTCTTTGTTTTGGGTTTGTAAGGTAAGATCTGAAGAAACTAATGATGATGATGAAGAACTATACTACCTATGTTATTGGTTAGATTGTCGTACTCGTAACATTGGTGGATTGGAAATTCCCTCAACGTACTTTGGAAATTGTTTGGTTAATGGCACTGCAGCAATGAAGAGGAGCAAGCTAGTGGGGCAGAATGGTATTTTTGAAGCAGCTGTTGCTATTGGGAACAAAGTTAGTGAAATGCAATGTGAACCTTATAAATATGCTGATACATTAAATTCTATTTTTAGTGAAGTTGCTAGAGCCGGACATCGTCTTTCGGGAATTGCAGGGTCACCAAAGTTGGATGTGTATGAGACTGATTTTGGGTGGGGAAAACCCAAATTGAGTGAAGTAGTTCACATAAATCCTCAGGTTCTCTCCCTCTCTGATTGTAGGGACAAGGAATGCGGAATAATTGAAGTTGGTGTAGTACTTGGGAGGACTCAAATGCATAAATTCAGCAACATTTTACAACAGATCCTTGCAGAATTGTAG 1392 0.4124 MEKKVNHDETVKVIEQCQVGPPPGSIPSPTSISLSFFDISFLCTPVTCKRIFFYQFPYPKQHLLQQVLPNLKQSLSLTLQHFFPFSSKIVFPPKPQTPHILYSEGDTLTFIVAESTTVNLHNLVSDTTKDVTCFHPFVPMLPSSRVLEDGTLLIPPMAIQLTIFPNSGFTICVNFSHVVVDGKGFHHFMKFWASLCASKQNSAPLPCHDRHMIEDQNGLKPLILQTVWNSPRERFMSLGHNAPSDNVRRMFVLMRDHVDNLKKYVSTECQRQGIGTFHLSTFVVTCSLFWVCKVRSEETNDDDEELYYLCYWLDCRTRNIGGLEIPSTYFGNCLVNGTAAMKRSKLVGQNGIFEAAVAIGNKVSEMQCEPYKYADTLNSIFSEVARAGHRLSGIAGSPKLDVYETDFGWGKPKLSEVVHINPQVLSLSDCRDKECGIIEVGVVLGRTQMHKFSNILQQILAEL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182147g00001 463 PANTHER - 11 461 - -
Stsc182147g00001 463 Pfam Transferase family 31 454 - -
Stsc182147g00001 463 Gene3D - 10 238 IPR023213 -
Stsc182147g00001 463 Gene3D - 242 461 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182147g00001 Stsc-Chr182147 8334 11164 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182147g00001 51 459 Monolignol Biosynthesis Gene Families AT5G48930 21.513 4.23e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182147g00001 - - ahf:112729058 491.5