Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc182135g00001 | ATGGAAGGTCGCCGGAGGATAACACTTTATGATCAAATGACAGCTAGCAAAACCACCTCTCTAGCAGATTTGATCCTTCACGACAGTTTCACCGCCGTCTCCTCCGCTGCAGACTCCACCTCCGCCACCGCCGCCGTCGATGCCGAAAGCTACGAATTGAACCAAAGCCGAACCCTCGTAGATATCCTTCGCGAAGATGAACACAACAACAACACAACGGACCGCAAATCTCGGAAATCCTTCAGTTTCATTGACAAGCTTAGATTCAAGCTTGCACTCAATTCAAGATCAAATTACAGTAGTGAAAACAATTCCGCTAACAACAACAACAACAATCATATTCAAACAAACCTGTCCGAGTTGCAAGCGCGCATCGATCCGGACGAGTTGACTCAGCAAGACGCGACGACTCAGCGATCGCAAAACGACGCCGTTGCTTCCACCGCGGCCGCAGACCGTGAAATCCCGGCGGAAGTTGCGGTGGCTGGACCAGTCGGCGTGTCGCTGATGGATTTGTTGGAAGAAACGGAGATAGAAACGGGATTCGAAGTTTCGAGTAACAGAATGAGCGACGCTGATTTTGAAGATGCGATTGAATGCGAAGTAGAAGAAGAAAAGTGCGAGGAAGAAGGGGCGAGTATCGTGGAACGTAACTGCTGCGTGTGCATGGTGAGGCATAGAGGCGCGGCTTTTATACCCTGCGGGCACACGTTCTGCAGGCTGTGCTCCAGGGAGGTTTGGGTCAACAGAGGCAACTGCCCTCTCTGCAATAATTTCATTTTGGAAATTCTTGATATTTTCTGA | 804 | 0.5 | MEGRRRITLYDQMTASKTTSLADLILHDSFTAVSSAADSTSATAAVDAESYELNQSRTLVDILREDEHNNNTTDRKSRKSFSFIDKLRFKLALNSRSNYSSENNSANNNNNNHIQTNLSELQARIDPDELTQQDATTQRSQNDAVASTAAADREIPAEVAVAGPVGVSLMDLLEETEIETGFEVSSNRMSDADFEDAIECEVEEEKCEEEGASIVERNCCVCMVRHRGAAFIPCGHTFCRLCSREVWVNRGNCPLCNNFILEILDIF | 267 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc182135g00001 | 267 | PANTHER | OS01G0917900 PROTEIN | 4 | 267 | - | - | |
Stsc182135g00001 | 267 | SMART | ring_2 | 219 | 256 | IPR001841 | - | |
Stsc182135g00001 | 267 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 190 | 267 | IPR013083 | - | |
Stsc182135g00001 | 267 | MobiDBLite | consensus disorder prediction | 131 | 150 | - | - | |
Stsc182135g00001 | 267 | SUPERFAMILY | RING/U-box | 218 | 263 | - | - | |
Stsc182135g00001 | 267 | Pfam | Zinc finger, C3HC4 type (RING finger) | 216 | 260 | - | - | |
Stsc182135g00001 | 267 | CDD | RING-HC | 219 | 256 | - | - | |
Stsc182135g00001 | 267 | ProSiteProfiles | Zinc finger RING-type profile. | 219 | 257 | IPR001841 | - | |
Stsc182135g00001 | 267 | MobiDBLite | consensus disorder prediction | 131 | 147 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc182135g00001 | Stsc-Chr182135 | 2519 | 3773 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc182135g00001 | 1 | 267 | C3H Transcription Factor Family | AT3G25030 | 36.396 | 1.36e-37 | 131 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc182135g00001 | - | - | gmx:100802736 | 201.445 |