Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182128g00001 ATGTTTCAGGGTGAAGATCTGATTATATCAAACTTAGGTGATTCAAGAGCAGTATTGGCAACAACTTCAGATTGTGGCATACTAAGTGCCCTTCAGCTTACAACTGACATGAAGCCAAATTTACCAAAGGAGGCAGAGAGGATAATGGAATCAAGAGGGAGGGTGTTTTGTCTAGAAGATGAGCCAGGAGTGTATAGGGTGTGGATGCCAAATGGTAAAACACCAGGACTTGCAATATCAAGAGCATTGGGTGATTATTGTGTCAAGGACTTTGGACTAATCTCTGTGCCTGAGGTCACTCAAAGGAAGCTTAACTCTAGAGATCAATTTCTTATCTTGGCTAGTGATGGGGTATGGGATGTAATTTCGAACCAAGAAGCAGTGAAGATAGTTGGTTCAAGTGAAGAGAAAGGAAAAGCTGCTGAGAGGCTTGTGAAATGCGCAACGCATGAATGGAAGAGGAAGAGAAGAGGCATTGCCATTGATGACATATCTGCTATCTGCCTCTTCTTTCAGCCTCATAACATTCTCACATCGCAATCATATGCATAG 552 0.4239 MFQGEDLIISNLGDSRAVLATTSDCGILSALQLTTDMKPNLPKEAERIMESRGRVFCLEDEPGVYRVWMPNGKTPGLAISRALGDYCVKDFGLISVPEVTQRKLNSRDQFLILASDGVWDVISNQEAVKIVGSSEEKGKAAERLVKCATHEWKRKRRGIAIDDISAICLFFQPHNILTSQSYA 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182128g00001 183 Pfam Protein phosphatase 2C 3 147 IPR001932 -
Stsc182128g00001 183 ProSiteProfiles PPM-type phosphatase domain profile. 1 171 IPR001932 -
Stsc182128g00001 183 SUPERFAMILY PP2C-like 2 173 IPR036457 -
Stsc182128g00001 183 PANTHER PROTEIN PHOSPHATASE 6 169 IPR015655 GO:0004722|GO:0006470
Stsc182128g00001 183 CDD PP2Cc 2 171 IPR001932 -
Stsc182128g00001 183 SMART PP2C_4 1 169 IPR001932 -
Stsc182128g00001 183 Gene3D - 1 173 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182128g00001 Stsc-Chr182128 496 2094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182128g00001 3 172 PP2C-type Phosphatase Gene Family AT3G05640 68.235 1.52e-84 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182128g00001 - - gmx:100814087 277.33