Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182123g00001 ATGGATTTAGTCCTCCTAACTTACCTAAACCCCACCACTGCAATCGTAGTCCTCTCTCTCACCATCTTACTCTCTTTTCTTTTCTTTCGTTACACAAAACTTAGCCACATCAAAGAACCTCCCATGGTGCCAGGTTCATGGCCTATACTTGGTCACCTTCTGCTCTTCCATGGTTCACAGCCACTCCACATAACCTTAGGAGCCATGGCCGACAAATACGGCCCCCTTTTCACCATCAAGCTTGGTTCCACAAAGATCGTAGTTCTAAGCAACTCGGAAATGGCCAAAGAATGCTTCACCAAGAATGACAAAGCTTCTTCCTCCCGCCCCAAACTCGTTGCCATTGAACACCTATCTTACAACCAAGCCATGTTTGGCTTCGCGTCATACGGTCCGTATTGGCGCGAAGTCCGCAAGATTGTGACCTTAGAACTTCTGTCAAATCGACGCATGGAGCTTCTTAGTCACGTTCGTGTCTCAGAAGTTCAAGCGTCAACGAAGGAGCTCCTGAATCTTTGGTCCACTCAGAAGGACGAGTCTTCTGGGTATGTGTTGGTGGACATAAAGCAATGGTTCGCAGAATTAACATTCAACATGGTTTTTAGAATGATTGCAGGGAAGAGATTCTTTGGCGCAATGAAGTCGGAGAGTGAGGAAAAGGCACAAAGGTGTGTGAAATGTGTTAAGGACATGTTGCGGTTACTGGGAGTGTTCACTGTTGGAGATGCCATTCCTTCTCTGAGATGGTTGGATATTGGGGGTCATGAGAAGGCCATGAAAGAAGTTGCCACGGAACTGGATAAGATTTTGACAGAATGGATAGATGAGCATCGCCAAATGATGGATTTGGGAGAAAAGGATGCAGATGAACGAGACTTCATCGATGTCATGCTTTCAGTGATTTCTGATGCAAAGATTGATACTTTTGATGCTGATACCATAATAAAAGCTACAATTTTGAATATGATTATAGGATCATCTGAAACAACTACAATTTCCATGACATGGGCAATGTGTCTGCTCTTGAAAAATCCTCATACATGGGAAAAGGCAAAAGAAGAACTTGACAAAGAAATAGGGAAAGAGAGATGTGCAAGTGAATCAGACATAAATAAATTAATATATCTTCAAGCTATAATCAAGGAGACATTAAGATTGTATCCACCTGCTCCTCTTACAGCAACTCATGAATTTTCAGAAAACTGCAATTTAGGTGGATACCATATCAAAAAGGGAACTCAGCTAATTGCAAATCTTTGGAAAATCAATAACGACCCTTGTTTATGGTCAAATCACTTAGAGTTCGCACCAGAAAAATTTCTCACAACACATAAAGATGTGGATGTTAGGGGAAATCATTTTGAGTTGTTACCTTTTGGAAGTGGTAGAAGAGTTTGTCCTGGAATTTCCTTTGGCCTTCAAATGATTCACTTTAGTTTGGCTAGCTTTCTGCATTCCTTTGAAGTATCAGTTCCACCTGATGAACCTATTGATATGAGTGGAACTCCTGGATTGGTGCATGCTAAAGCTACCCCATTAAAGATTATGGTTAAACCACGTTTATCTCTCAGCTGTTATGAAACCATTTAG 1590 0.4164 MDLVLLTYLNPTTAIVVLSLTILLSFLFFRYTKLSHIKEPPMVPGSWPILGHLLLFHGSQPLHITLGAMADKYGPLFTIKLGSTKIVVLSNSEMAKECFTKNDKASSSRPKLVAIEHLSYNQAMFGFASYGPYWREVRKIVTLELLSNRRMELLSHVRVSEVQASTKELLNLWSTQKDESSGYVLVDIKQWFAELTFNMVFRMIAGKRFFGAMKSESEEKAQRCVKCVKDMLRLLGVFTVGDAIPSLRWLDIGGHEKAMKEVATELDKILTEWIDEHRQMMDLGEKDADERDFIDVMLSVISDAKIDTFDADTIIKATILNMIIGSSETTTISMTWAMCLLLKNPHTWEKAKEELDKEIGKERCASESDINKLIYLQAIIKETLRLYPPAPLTATHEFSENCNLGGYHIKKGTQLIANLWKINNDPCLWSNHLEFAPEKFLTTHKDVDVRGNHFELLPFGSGRRVCPGISFGLQMIHFSLASFLHSFEVSVPPDEPIDMSGTPGLVHAKATPLKIMVKPRLSLSCYETI 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182123g00001 529 CDD CYP82 74 520 - -
Stsc182123g00001 529 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182123g00001 529 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182123g00001 529 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182123g00001 529 Pfam Cytochrome P450 41 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182123g00001 529 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182123g00001 529 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182123g00001 529 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182123g00001 529 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182123g00001 529 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182123g00001 529 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182123g00001 529 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182123g00001 529 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182123g00001 529 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182123g00001 529 FunFam Cytochrome P450 82C4 30 518 - -
Stsc182123g00001 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Stsc182123g00001 529 Gene3D Cytochrome P450 31 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182123g00001 529 SUPERFAMILY Cytochrome P450 44 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc182123g00001 529 PANTHER CYTOCHROME P450 82C3-RELATED 17 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182123g00001 Stsc-Chr182123 7863 10627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182123g00001 1 521 Cytochrome P450 AT4G31940 46.970 1.34e-176 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182123g00001 - - adu:107490967 701.434