Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182072g00002 ATGGAGAGGAAAGCATCATCACTTGGCTTCTTCTTCTTTCTTCTCATCATTATCTTTTCTGCTCAAATGGTGGTGCAAACAGAGGGAAGAGTGTGCCAGTCAAAGAGCCACATGTTCAAGGGTGCATGCTGGGGTGACCACAACTGCGCTCTTGTCTGCAGGAACGAGGGCTTCTCCGGTGGCCGCTGCCGCGGTTTTCGACGCCGCTGCTTTTGCACTAAGCTTTGTTAA 231 0.5108 MERKASSLGFFFFLLIIIFSAQMVVQTEGRVCQSKSHMFKGACWGDHNCALVCRNEGFSGGRCRGFRRRCFCTKLC 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182072g00002 76 Pfam Gamma-thionin family 30 76 - -
Stsc182072g00002 76 PANTHER DEFENSIN-LIKE PROTEIN 1 5 76 - -
Stsc182072g00002 76 SMART gth_4 31 76 IPR003614 GO:0006952
Stsc182072g00002 76 PRINTS Purothionin signature 61 75 IPR008176 GO:0006952
Stsc182072g00002 76 PRINTS Purothionin signature 31 46 IPR008176 GO:0006952
Stsc182072g00002 76 ProSitePatterns Gamma-thionins family signature. 30 53 IPR008176 GO:0006952
Stsc182072g00002 76 SUPERFAMILY Scorpion toxin-like 30 76 IPR036574 -
Stsc182072g00002 76 Gene3D - 30 76 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182072g00002 Stsc-Chr182072 15798 16967 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182072g00002 12 76 Plant Defensins Gene Families AT5G63660 67.692 5.75e-30 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182072g00002 - - vvi:100252765 102.064