Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182046g00001 ATGTGTTGTGCCAAATTGAACAGGTTTTGGAGGCTTTCAATACCTGTTGGGGAAACCACTGATCACCAACTTGTGAATCCATTCGGACCAAATAGCAAGAGCCTTGAAGCAATTGATCTTGACCCAATTCTTGTGGTGGTTGGAGGTAGTGATTTGCTTAGAGACAGGGCAGAGGATTATGCAATGAAACTTAAAGATTGGGGTAAAGATGTTGAGTATGAAGAATTTGAAGGGCAGCAACATGGTTTTTTCACCATTAATCCCAACTCGGAGCCATCAAAGAAGTTGATGTTGGTCATCAAACAGTTTATGAACAAGTATTCTGCCTAA 330 0.4091 MCCAKLNRFWRLSIPVGETTDHQLVNPFGPNSKSLEAIDLDPILVVVGGSDLLRDRAEDYAMKLKDWGKDVEYEEFEGQQHGFFTINPNSEPSKKLMLVIKQFMNKYSA 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182046g00001 109 Pfam alpha/beta hydrolase fold 5 84 IPR013094 GO:0016787
Stsc182046g00001 109 SUPERFAMILY alpha/beta-Hydrolases 6 107 IPR029058 -
Stsc182046g00001 109 Gene3D alpha/beta hydrolase 3 106 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182046g00001 Stsc-Chr182046 6436 7064 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182046g00001 9 105 Carbohydrate Esterase AT3G05120 38.144 6.29e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182046g00001 - - aprc:113858789 181.415