Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182035g00002 ATGTTTTTGGTGTATGAATACTTGGAAAGAGGAAGCTTGTTCTATAACTTGGCGAATGAGACGGAAGCTAAAGAGTTGAATTGGAGAAAGAGGGTGAAGATCATTAAAGGGACAGCATATGCTCTTGCTTACATGCATCATCATTGTACTCCTCCTATTGTTCATAGAGATGTTACCACTAGCAATATACTGCTGAATTCAGAGTTGGATGCTTGTGTATCAGATTTTGGCACTGCAAGACTTCTTGATACTGATTCATCTAATCGTACTCTTCTAGTTGGAACTTATGGATATCTTGCTCCAGAATTGGCTTACACCATGAATGTGACTACAAAATGTGATGTGTTTAGTTTTGGAGTGGTGGCATTAGAAACAATGATGGGGCATCATCCAGGAGAATTTGTTTCCTTTTTGTCAAAGCCATTTACTCAAAACTTGTTGGTTAAGCAAGTACTGGATTCGCGAATTCCGCTACCGAATCTTAAGGAAGACATACAAGATGTTGTGCTTGTTGTAACACTAGCATTGGCATGCCTCTCTTCTGATCCAAAATCAAGACCATCAATGGAAGATGTAGCTAATGTGTTTTTGGCTTCTAAGTACTCTTCTTCTTCATTCTCTGCAGAAACAGTTTCCATTCTGCTTCTTCATCTCATAATTAGTTGCTGGAAGTAA 675 0.3867 MFLVYEYLERGSLFYNLANETEAKELNWRKRVKIIKGTAYALAYMHHHCTPPIVHRDVTTSNILLNSELDACVSDFGTARLLDTDSSNRTLLVGTYGYLAPELAYTMNVTTKCDVFSFGVVALETMMGHHPGEFVSFLSKPFTQNLLVKQVLDSRIPLPNLKEDIQDVVLVVTLALACLSSDPKSRPSMEDVANVFLASKYSSSSFSAETVSILLLHLIISCWK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182035g00002 224 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc182035g00002 224 FunFam MDIS1-interacting receptor like kinase 2 8 202 - -
Stsc182035g00002 224 SUPERFAMILY Protein kinase-like (PK-like) 2 195 IPR011009 -
Stsc182035g00002 224 Gene3D Transferase(Phosphotransferase) domain 1 1 213 - -
Stsc182035g00002 224 ProSitePatterns Tyrosine protein kinases specific active-site signature. 53 65 IPR008266 GO:0004672|GO:0006468
Stsc182035g00002 224 PIRSF ILK 1 199 - -
Stsc182035g00002 224 PANTHER LEUCINE RICH REPEAT KINASE 2 1 202 - -
Stsc182035g00002 224 Pfam Protein kinase domain 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182035g00002 Stsc-Chr182035 6646 7652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182035g00002 2 192 Receptor kinase-like Gene Family AT1G72180 38.647 1.13e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Stsc182035g00002 Pkinase 1.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182035g00002 - - adu:107475518 350.903