Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182029g00004 ATGGCGAAAGGAGGGAAGCTTACAAAGCTGAGGTCTGTGCTTAAGAAATGGAACTCGTTTGGAAGCAAGCAGAGCAGGCACAACAGCAGCGCGGTGGCAGACGATGAGGATGACAACAACAGGACGAGGGAGCTCCACCCGGTGTACGTGGGCAAGTCTCGGCGGCTGTACCGGGTGTCTTCGGAGGTGGTGGAGCACCCTGTGTTCAGAGAACTTGTGGAGAGATCACGTGAGGAGCAGGAGGCGGAGGCGGAGGATGATGTGGGAAGGATCGTTGCCTGCGAGGTTGTTCTCTTCGAGCATCTTCTCTGGATGCTCGAAAATGGCGATCCACAACCTCATGAACTTGTCGACTTCTATGCTTGCTAG 369 0.5528 MAKGGKLTKLRSVLKKWNSFGSKQSRHNSSAVADDEDDNNRTRELHPVYVGKSRRLYRVSSEVVEHPVFRELVERSREEQEAEAEDDVGRIVACEVVLFEHLLWMLENGDPQPHELVDFYAC 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182029g00004 122 PANTHER EXPRESSED PROTEIN 19 121 - -
Stsc182029g00004 122 MobiDBLite consensus disorder prediction 29 44 - -
Stsc182029g00004 122 MobiDBLite consensus disorder prediction 19 44 - -
Stsc182029g00004 122 Pfam Auxin responsive protein 15 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182029g00004 Stsc-Chr182029 25259 25818 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182029g00004 3 122 Calmodulin-binding Proteins AT4G34750 26.866 2.85e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182029g00004 - - gmx:100808463 155.221