Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182029g00003 ATGATGAAAGGTTATTTTAAAAATCCAGATGCTGCAAGATCAACTATAGATGAGAATGGGTGGGCCCATACTAGAGATCTTGGATATTTTGATGAGGAGGGTCAACTTTATGTTGTTGACCGTCTCAAAGAACTCATCAAGTATAAAGGTCTTCAGGTTGAGTCATCACCACTCCATCACTCATGCCTCTGTTGCCACTTTACTCACCAGCACTCCCCCACCCTCTTTGTCGCTCTCTCTGCGTCACTCCGGTTCTCCATCTCTCTGTCTCGCAACGCTCACCAGTTCAATATAGGTGCTGGACTCCATTGA 312 0.4551 MMKGYFKNPDAARSTIDENGWAHTRDLGYFDEEGQLYVVDRLKELIKYKGLQVESSPLHHSCLCCHFTHQHSPTLFVALSASLRFSISLSRNAHQFNIGAGLH 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182029g00003 103 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 60 - -
Stsc182029g00003 103 Pfam AMP-binding enzyme 1 48 IPR000873 -
Stsc182029g00003 103 Gene3D - 1 44 IPR042099 -
Stsc182029g00003 103 SUPERFAMILY Acetyl-CoA synthetase-like 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182029g00003 Stsc-Chr182029 20894 22450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182029g00003 1 58 Monolignol Biosynthesis Gene Families AT4G05160 65.517 6.09e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182029g00003 K01904 - atri:130798435 97.0561