Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc182015g00001 ATGCATCATCACCACCAACATCAGATGCAGCAGCTAGCAGCATGTTCAGTTGTGGATGGCTTCTCACAGTATCCCACTGACACTAGTGTTGTTGCACCACCTCCTCTAATGGGGGCTCCTCAATTGCCTTCTGTTTTTGAAGAGGATTGCATTTCTTCTGCTGTCCCTTCTTATGTGACTCTCAACCCTTCTTCTCCTTCTTGCTCTTATCTCAACCCTGCTGGAATTCCACCACCATACATGCCTCCTGGTGGTCCTCTGGCCACCGCCTTGTCGGCCGACCGTGCTGCTTTGTTCACCGGCAGCATGCTTCTTGGCTCTGAGCTTCAGAGACCAGACCTGGAATACCAAGGAGAAAATGGTGGAATTTATTGTACAGATTCAATTCAGAGAGTGTTTAACCCTCAAGAGCTTCAGGCACTTAGTACTGAGAGTCAGCAACTAGTGGCTGGAGGTGGGGGTTCTGCCAACTTGGCACCAGAAATCTCAAACTTGGAGGACTCTAGCTTCAAGGTTGGGAAACTCTCTGTTGAGCAAAGGAAAGAAAAGATTCACAGATACATGAAGAAAAGAAATGAGAGAAACTTCAGCAAGAAAATTAAGTATGCCTGCCGCAAAACTTTGGCGGATAGCCGGCCTCGAGTTCGAGGAAGGTTCGCAAAGAATGATGACTTTGGAGATACTCATAGACCTGCTAGTAGCAATCATGAAGAAGAAGATGAAGAAGAAGTAGTTGTGAAAGAAGAAGATGATATGGTTGATTCCTCAGATATCTTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATTCCATTCAGTCCTGGATTTGA 837 0.4588 MHHHHQHQMQQLAACSVVDGFSQYPTDTSVVAPPPLMGAPQLPSVFEEDCISSAVPSYVTLNPSSPSCSYLNPAGIPPPYMPPGGPLATALSADRAALFTGSMLLGSELQRPDLEYQGENGGIYCTDSIQRVFNPQELQALSTESQQLVAGGGGSANLAPEISNLEDSSFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTHRPASSNHEEEDEEEVVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc182015g00001 278 ProSiteProfiles CCT domain profile. 180 222 IPR010402 GO:0005515
Stsc182015g00001 278 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 57 242 IPR045281 GO:0009909
Stsc182015g00001 278 Pfam CCT motif 180 222 IPR010402 GO:0005515
Stsc182015g00001 278 MobiDBLite consensus disorder prediction 218 237 - -
Stsc182015g00001 278 MobiDBLite consensus disorder prediction 218 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc182015g00001 Stsc-Chr182015 3098 5140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc182015g00001 180 238 C2C2-CO-like Transcription Factor Family AT5G57660 46.875 2.97e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc182015g00001 CCT 3.1e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc182015g00001 - - aprc:113871720 395.586