Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181981g00002 ATGGAACAAGTTAGTATTGTTGGTGAGTTAATGCAAGGAAAGGAGTTAGCAAAGAAGCTCTTTGAACATTTGAATTCATCATCATCTCCATCACCACCATCATCATCATCATCATCATCATCATCATCATCATCACATGAATCTAATGAAGCTTTGATAGAGAAGATACTTTCAACCTATGAGAAAGCACTCACCATGCTCAATAACACCAACATCATGAAAGATTCTTCTCATTGTTCATCTTCTTCTCTTGCAAATGGTAGCACAAAAAATGAGGTCTTGGACAAAGAGGTAGTTGCTCCAAAGAACAAAGAAGTGTCCAAGAAAAGAAAAACTATGTCAATGTGGACAAAGCAAGTGAAGGTGTGTTTGGGAACAGCAATTGATGGTTCTATGGAAGATGGCCATAGCTGGAGAAAATATGGACAGAAAGATATTCTTGGAGCTAAGTTTCCAAGAGGATATTACAGATGTACACATAAACATGTACAAGGTTGTTTGGCCACAAAACAAGTTCAAAAATCAGATGAAGATCCAAATGTGTTACAAATAACCTACAAAGGAAGACACACTTGCATTCAACAAGTTAATAATCATCTCTCAAAAAGAGCAACAACAACAGCAACTTCAAAACCAAACATGGCCTTATTATTAGATCATCATCATCCACAAGAAGAAGAGATCAAAACAGAACAACCCCATGAAACAATTCTCACATTTGGATCATCACCATCCTCATCATCATCACAAGAACTTGAAGACAAAATTGATGACTTTGACTTTGACTTTGACCTTGACATAAAGGAGAACATTTTCCCTTCATTTTACTTCACTTCTCCAACAATAGTTTCTGAAATTGAAAGCTTTTCTCCTGAATTCATATCACCAACAACAAATTCAGAATCAAACAGCATTTTCCACTTTCAAACCTCAGATTCTGATTTTAGTGAGAATGTTTCAGCACCAACTTCAGTCTCCAAATCACCAATAATAGCAGGATTGGATTTTCACTCCTTTGATGATAAGGTGGATTTTGATAACTATTTCTCTATGAACTCCTAG 1062 0.3588 MEQVSIVGELMQGKELAKKLFEHLNSSSSPSPPSSSSSSSSSSSSHESNEALIEKILSTYEKALTMLNNTNIMKDSSHCSSSSLANGSTKNEVLDKEVVAPKNKEVSKKRKTMSMWTKQVKVCLGTAIDGSMEDGHSWRKYGQKDILGAKFPRGYYRCTHKHVQGCLATKQVQKSDEDPNVLQITYKGRHTCIQQVNNHLSKRATTTATSKPNMALLLDHHHPQEEEIKTEQPHETILTFGSSPSSSSSQELEDKIDDFDFDFDLDIKENIFPSFYFTSPTIVSEIESFSPEFISPTTNSESNSIFHFQTSDSDFSENVSAPTSVSKSPIIAGLDFHSFDDKVDFDNYFSMNS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181981g00002 353 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc181981g00002 353 Pfam WRKY DNA -binding domain 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc181981g00002 353 Gene3D WRKY domain 105 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc181981g00002 353 ProSiteProfiles WRKY domain profile. 127 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc181981g00002 353 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 303 IPR044810 GO:0003700
Stsc181981g00002 353 MobiDBLite consensus disorder prediction 22 48 - -
Stsc181981g00002 353 SUPERFAMILY WRKY DNA-binding domain 131 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc181981g00002 353 FunFam WRKY transcription factor 53 118 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181981g00002 Stsc-Chr181981 19971 23084 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181981g00002 41 197 WRKY Transcription Factor Family AT5G24110 46.497 2.26e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc181981g00002 WRKY 3.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181981g00002 - - gmx:100170747 312.383