Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181974g00001 ATGGCTTCTACTACTCACATGACTTCAAAACCAAAACGCATATCAGGTCAGAACAAATCACAATCAAATGCTGCAATATCATCTCAGGATGAGGTAGCACTTCCATTGCCTCTTCCAGTGAATGGTTTTGCGTCAGTTTCCGATGATGCAAATCAAGGACGTGTTCCATCTGATGGAGAGAGCAACTTGGGAATTCTCAAGCAAAGGCGTGAAGTTAGCGAGCAGGATAACCTACCAAATATAGATGATGATTGCAATCATTTAGAAGTACCTGAATATGTTGATGACATTTATCAGTACTATTGGGTTACTGAGGCGCAAAATCCAGCTTTGGCAAATTACATGTCCAACCAGAAAGAAATTACACCTTATATGCGGGGCTTTTTGATCAACTGGTTGATTGAAGTGCACATGAAGTTTGATTTGATGCGAGAAACACTATATCTCACAGTGACATTATTGGATCAATATCTTTCCATGGTCAAAGATTTAGTAAGCATCTTGGCTGAGTCATATACAAGAGATCAAATGCTTGAAATGGACTCAGGAGACCTGCATTATAACATCTGTTAA 573 0.3927 MASTTHMTSKPKRISGQNKSQSNAAISSQDEVALPLPLPVNGFASVSDDANQGRVPSDGESNLGILKQRREVSEQDNLPNIDDDCNHLEVPEYVDDIYQYYWVTEAQNPALANYMSNQKEITPYMRGFLINWLIEVHMKFDLMRETLYLTVTLLDQYLSMVKDLVSILAESYTRDQMLEMDSGDLHYNIC 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181974g00001 190 Gene3D - 96 109 - -
Stsc181974g00001 190 SUPERFAMILY Cyclin-like 86 181 IPR036915 -
Stsc181974g00001 190 Gene3D - 110 160 - -
Stsc181974g00001 190 MobiDBLite consensus disorder prediction 1 29 - -
Stsc181974g00001 190 PANTHER CYCLINS 62 162 IPR039361 -
Stsc181974g00001 190 MobiDBLite consensus disorder prediction 1 30 - -
Stsc181974g00001 190 Pfam Cyclin, N-terminal domain 96 160 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181974g00001 Stsc-Chr181974 9938 11824 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181974g00001 71 181 Core Cell Cycle Gene Families AT1G16330 52.857 7.11e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181974g00001 K21777 - tpra:123899654 215.698