Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181963g00001 ATGATGTGGATTCTGGGATTGTCCATTATTGTGTCTGTTATAGTAATCTATGCATTTCAATGGATTATTATGCTTACAGACCCAAAATTCAGAAATAGATCTTCTCTCCCTCCTGGTTCCATGGGTTTTCCATTCATCGGAGAGACTCTTCAGTTCATGATCCCAAGTTACTCATTGGACATTCACCCTTTCATCACAAGGAGAATCCAGAGATTCGGCCCCATATTTCGAACCAGTTTATTTGGAAAACCGGTTATAATTTCAACAGACCCTGAATTCAACAATTACTTGATTCAACAAGAAGGTAATTTGGTTGAAAATTATTCGGGTCCTGTTTCTACGATTCTTGGAAAATTTGGTGTATCTGCTAGTGACATACACAAGTATGTTCGAAGCATCACTCTAAATCATACTGGTCCCGAACGAATCAGAGAAAAGTTGATTCCTCAATTTGAAGACATGATTATCAAGACTTTGCATCAATGGTCAACTCAAACATCTGTTGATGTTAAACAATCTATAACAAAGATGAACTTTCATTTCTTTGCAAAGCATTTTTTTGGGTATGATATTGAAAAGTTACCTAGCAATACTGAAAGGATATCAGAAGAATTATTTACAGATTTTACAGACGGGTTCAAGACAATTCCATTAAATATTTATGGAACAACTTACCACAAATGTTTGGAGGAATGGAAAAAAGCATTTAAAATTGTCAAGAATATGTTGGAAGCAAGGCGCAATTCACCAGAAAAATATCGGGGAGATCTTCTTGACCAAGTAATTGATGACTTGGAGAAGGAAAAACTTATGAATGTTGACCAGAATGTGTTACTTATAATAGGGATATGGTTTGCCACTTGTGCTTCAATATCATCAGCAGTACAATTACTCTTTAAGTTTTTATCGGATGATCCTTCAGTCCTTGAAGAACTCAGAGAGGAACATGAGAAAATTCTCAGAAGTAGAGACAAATCAAGCTCTTCATTAACATGGAATGAATACAAATCCATGAAATTTACGCAACAGGTAATGAACGAGGCCCTTAGGTTCACACTTTTGCTTCCTGGACTAATAAGAATAGCATTAAGAGATATTCACTTAAAAGAATATATTATTCCTGCTAATTGGATCATCCTGGTCTTTACTCCAAATCTTCATATGAACTCAGAAATATATAAAGATCCACTTACCTTCAATCCATGGCGCTGGAAAGTGTGTATGAAATTTCCATTTCATTTATTTATCTATCTTACTTTCTTAATTAACTTGATCACTAATAAATTTCTCATATCATTTAATGCAATCAAGGATCTTGATTCTCTCACTGTGTCAAAAAATTTCAAACCTTTTGGTGGAGGATTGGGACAGTGTCCAGGAGCTGAGTTAAGTAGAGCTTTCACAGCCACGTTTCTTCATGTTTTGGTCACAAAATATAGGTGGACAAAAATCAAGGGAGGAAAAGCTGTTCGGAATCCCATTCTGGGATTTAGTGATGGAATTCACATTAAAATCTGGGAGGATGCTGAATAA 1533 0.3542 MMWILGLSIIVSVIVIYAFQWIIMLTDPKFRNRSSLPPGSMGFPFIGETLQFMIPSYSLDIHPFITRRIQRFGPIFRTSLFGKPVIISTDPEFNNYLIQQEGNLVENYSGPVSTILGKFGVSASDIHKYVRSITLNHTGPERIREKLIPQFEDMIIKTLHQWSTQTSVDVKQSITKMNFHFFAKHFFGYDIEKLPSNTERISEELFTDFTDGFKTIPLNIYGTTYHKCLEEWKKAFKIVKNMLEARRNSPEKYRGDLLDQVIDDLEKEKLMNVDQNVLLIIGIWFATCASISSAVQLLFKFLSDDPSVLEELREEHEKILRSRDKSSSSLTWNEYKSMKFTQQVMNEALRFTLLLPGLIRIALRDIHLKEYIIPANWIILVFTPNLHMNSEIYKDPLTFNPWRWKVCMKFPFHLFIYLTFLINLITNKFLISFNAIKDLDSLTVSKNFKPFGGGLGQCPGAELSRAFTATFLHVLVTKYRWTKIKGGKAVRNPILGFSDGIHIKIWEDAE 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181963g00001 510 PANTHER CYTOCHROME P450 26 34 483 - -
Stsc181963g00001 510 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181963g00001 510 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181963g00001 510 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181963g00001 510 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181963g00001 510 Pfam Cytochrome P450 37 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181963g00001 510 Gene3D Cytochrome P450 25 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181963g00001 510 SUPERFAMILY Cytochrome P450 33 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181963g00001 Stsc-Chr181963 4398 8736 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181963g00001 2 505 Cytochrome P450 AT1G12740 39.689 2.33e-121 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181963g00001 - - aip:107619015 760.755