Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181956g00001 ATGCCGAATCCCGAGGCTCACCGCCATAACCAAAATCGCTCCAGCAAGTCACGCCCTTCCACTTCATCGGAAAGGCCGGTCGCGCCGCGCCCGCCGGCTCGGCCGAGAGTCCGGCTCCGGCAGCTGCTACGTGTCGCTTCTGTAGCCAGCGGAATCCAGTTCGGATGGGCGCTGCAACTATCTCTCCTAACCCCCTATGTTCAGCAGCTCGGGATCCCTCACCAGTGGGCCAGCATCATCTGGCTCTGCGGTCCGGTCTCTGGCCTCTTCGTTCAGCCACTCGTCGGACACCTCAGCGACCGCTGCACCAGCCGCTTTGGTCGCCGGCGTCCTTTCATCCTCGCCGGTGCCGCTGCGATCATCGTTGCTGTCATCATAATTGGATACGCTGCTGACATCGGCTGGCTCCTCGGCGACACCGATACTTTCCGGCCGGCGGCAATAACCGTCTTCGTAATCGGCTTCTGGATCCTCGATGTGGCGAATAACGTGACTCAAGGTCCTTGTAGAGCTCTGCTGGCTGATCTCACTACCAATGATCCCAGAAGGACGCGTGTTGCAAATGCTTATTTCTCTCTTTTTATGGCTGTTGGTAATATTCTTGGTTATGCAACTGGATCTTACAGTGGTTGGTACAAGATATTTGCTTTTACACTTTCACCTGCATGCACTATTAGTTGTGCAAACCTCAAGTCCGCTTTCATTCTCGATATTATTTTCATTGTGATCACCACATATCTCAGCCTCATGGCGGCAAAAGAAGTGCCTATAACTTCAACTGCGTCAGCCCATGCTGAGGGAGGAGCAGGGGGTTCAGGTAGTACAGAAGAGGCTTTCATGTGGGAGCTATTTGGGACATTCAAATATTTTTCAACTCCTGTATGGATTATCATGTCTGTTACTGCTCTAACATGGATTGGATGGTTCCCTTTTATTTTATTTGATACTGATTGGATGGGTCGAGAGATTTATGGCGGTGATCCAAATGGTGGCCTGGATTATGATGCTGGGGTTAGAATGGGCGCACTTGGGTTAATGCTTAATTCAGTTGTTCTTGGAATAACATCATTACTCATGGAGAGGCTATGCAGGAAACGCGGGGCTGGATTTGTTTGGGGTGTCTCAAATATTATAATGGCCATCTGCTTTCTTGCAATGCTTGTAGTAACATATGTTGCTAGCAGTGCTGGTTATTTAGGCAAAGAGGCACCACCAACTGGAATTGTGATAGCTGCAGTAATACTCTTCACCATTCTTGGCTTTCCATTATCAATAACTTACAGTGTTCCATATGCCTTAATTTCCACACATATTGAGTCATTGGGACTTGGCCAAGGGTTATCAATGGGTGTCCTAAATCTGGCAATAGTGGTCCCACAGATAGTGGTGTCGTTGGGAAGTGGACCATGGGATCAGCTGTTTGGTGGAGGAAATGCTCCAGCCTTTGTTGTGGCAGCACTTGCGGCCCTTGTAAGTGGACTCATAGCTATCCTGGCTATTCCCCGATCCGGTGGACAAAAGCCCCGAAGTCGTGTATGA 1539 0.499 MPNPEAHRHNQNRSSKSRPSTSSERPVAPRPPARPRVRLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGHLSDRCTSRFGRRRPFILAGAAAIIVAVIIIGYAADIGWLLGDTDTFRPAAITVFVIGFWILDVANNVTQGPCRALLADLTTNDPRRTRVANAYFSLFMAVGNILGYATGSYSGWYKIFAFTLSPACTISCANLKSAFILDIIFIVITTYLSLMAAKEVPITSTASAHAEGGAGGSGSTEEAFMWELFGTFKYFSTPVWIIMSVTALTWIGWFPFILFDTDWMGREIYGGDPNGGLDYDAGVRMGALGLMLNSVVLGITSLLMERLCRKRGAGFVWGVSNIIMAICFLAMLVVTYVASSAGYLGKEAPPTGIVIAAVILFTILGFPLSITYSVPYALISTHIESLGLGQGLSMGVLNLAIVVPQIVVSLGSGPWDQLFGGGNAPAFVVAALAALVSGLIAILAIPRSGGQKPRSRV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181956g00001 512 MobiDBLite consensus disorder prediction 1 33 - -
Stsc181956g00001 512 Pfam MFS/sugar transport protein 57 203 - -
Stsc181956g00001 512 CDD MFS_SLC45_SUC 42 478 - -
Stsc181956g00001 512 SUPERFAMILY MFS general substrate transporter 38 505 IPR036259 -
Stsc181956g00001 512 Gene3D MFS general substrate transporter like domains 36 499 IPR036259 -
Stsc181956g00001 512 FunFam Sucrose transport protein 36 500 - -
Stsc181956g00001 512 NCBIfam sucrose/proton symporter 38 503 IPR005989 GO:0005886|GO:0008515|GO:0015770
Stsc181956g00001 512 PANTHER SUGAR TRANSPORTER 36 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181956g00001 Stsc-Chr181956 2743 9969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181956g00001 7 508 Sucrose Transporter Gene Family AT1G09960 71.429 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181956g00001 K15378 - gmx:100820483 822.387