Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181936g00005 ATGGTTATTATGGAGCATATGAGTAGTAATTTATTGGGTCGTAGGAAGGCAATTGAGGAGCTTGAGAAGGGTCGTGAATTTGCAAACAAGCTTAGGGTTCTGATAAACGGCGGCAGCGACGACAACGGCAACAGCGAGCAACTTGTGAAGAAGGTTCTTATGTCATTCACAAACTCGCTCTTGATCTTGAACAAGAACTGTGATGAGGTCAATAATGATGTGCCTTCTTCATGTGGGATGAATCCAACCAAGTCTGAGGATTCACTTGAGAGTAATTGCAAGAGCTCTGTTCATAAAGAACGAAGAGGGTGTTACAAGAGAAGGAACTACTACAGATGCACACACAAATTTGACCAAGGTTGTCAAGCAACAAAACAAGTGCAACAAGTTGAAGATGAAGCATCACCACTTTACAAGACCACATACTATGGAATCCACACTTGTAGGAACAACCTGAACCCTCAAATCATATTGGATGATTCCAATGATACAAAACCTTCAATCTTCCTCAGCTTTGATAATTCCCTCCCAACAAAACAAGATTGTCCAATTTTCCTCTCATCATCATCATCATCATCATCACAAGTAATCAAGAAGGAAGAAGAGGACATTCATAATAATAATAATAATAATAATAATAATAATAATAATAATAACAATAATATTAATAATAATAATGTTCCTTCATGTTCTTCAAATGATTACATGCTATATTCGGAGCTCACTTTTGATAACTACTCAAAACATCATCATGTTAACGCTCTATCATCATCAACACTTGACTCAGATGATGTTATTTCTGGTGGATTCTATGATCCTTCTCAGCTTGATGATGATGTCTTTGAGAATTTTTTTGATTATTAA 864 0.3623 MVIMEHMSSNLLGRRKAIEELEKGREFANKLRVLINGGSDDNGNSEQLVKKVLMSFTNSLLILNKNCDEVNNDVPSSCGMNPTKSEDSLESNCKSSVHKERRGCYKRRNYYRCTHKFDQGCQATKQVQQVEDEASPLYKTTYYGIHTCRNNLNPQIILDDSNDTKPSIFLSFDNSLPTKQDCPIFLSSSSSSSSQVIKKEEEDIHNNNNNNNNNNNNNNNNINNNNVPSCSSNDYMLYSELTFDNYSKHHHVNALSSSTLDSDDVISGGFYDPSQLDDDVFENFFDY 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181936g00005 287 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 108 204 IPR044810 GO:0003700
Stsc181936g00005 287 MobiDBLite consensus disorder prediction 186 227 - -
Stsc181936g00005 287 SUPERFAMILY WRKY DNA-binding domain 100 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc181936g00005 287 Gene3D WRKY domain 85 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc181936g00005 287 Pfam WRKY DNA -binding domain 99 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc181936g00005 287 SMART WRKY_cls 98 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc181936g00005 287 Coils Coil 197 217 - -
Stsc181936g00005 287 MobiDBLite consensus disorder prediction 207 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181936g00005 Stsc-Chr181936 26709 29373 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181936g00005 14 286 WRKY Transcription Factor Family AT2G40750 25.496 2.83e-18 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc181936g00005 WRKY 4.6e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181936g00005 - - ahf:112797210 371.703