Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181932g00001 ATGTCTCCAACAGGTTCATCAAGATGGAGCCCTACAACTGAACAACTAATGATCTTGGAGGAACTGTATAGGAGTGGGATTAGAACTCCAAGTGCTTCTCAGATTCAACAGATCACAACTCATCTTTCTTTCTATGGAAGGATTGAAGGCAAGAATGTCTTCTACTGGTTCCAAAATCATAAGGCTAGGGATAGACAGAAGCTTAGAAGAAAGCTTAACAAACAGCTCCAGCTACAGCAGCAACTTCAGCTCCATAGTGACCATCACTTCAACCACCAAGATTTTGGTAACCGTTTTGTTCCTTCTGCTTTTGGTTATCCTCCTTCTTGTTCTTCACCTGCTTCCAAACAACTTCCCTTCTATGCCACAACTACTACTGGTTTGTTTTTTCAGGGAGGAGGAGTAGCTGCATACGCATCACAAGAGGGGGCGATGAATTGCAAGTGTAGTGTGCATCATAAATCAGAAAGTTTGTTGGAGAAGAATAAAGAGATTAGATTCTTCAACAATAATTATGGTTGGACACTTGGTGGTGGCGATGTTAATCATCATCATCATCATCATCAAGAATCACCATGTTGCACTACTACTAATCAACCTCTCCAGACTCTTGACCTCTTTCCAGTCACATCCACTACCAGAATCAAAGAAGATTGCACCAAGGCTCTCATGTCTGATCATCAGTGGTAG 690 0.4188 MSPTGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQLQLHSDHHFNHQDFGNRFVPSAFGYPPSCSSPASKQLPFYATTTTGLFFQGGGVAAYASQEGAMNCKCSVHHKSESLLEKNKEIRFFNNNYGWTLGGGDVNHHHHHHQESPCCTTTNQPLQTLDLFPVTSTTRIKEDCTKALMSDHQW 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181932g00001 229 Gene3D - 3 67 - -
Stsc181932g00001 229 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 219 IPR044555 GO:0003700|GO:0099402
Stsc181932g00001 229 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Stsc181932g00001 229 CDD homeodomain 8 67 IPR001356 GO:0003677
Stsc181932g00001 229 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Stsc181932g00001 229 SUPERFAMILY Homeodomain-like 7 67 IPR009057 -
Stsc181932g00001 229 SMART HOX_1 4 71 IPR001356 GO:0003677
Stsc181932g00001 229 FunFam WUSCHEL-related homeobox 4 6 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181932g00001 Stsc-Chr181932 3691 5035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181932g00001 1 221 Wox Gene Family AT2G28610 39.922 2.16e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Stsc181932g00001 Homeodomain 8.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181932g00001 - - gmx:102662354 202.986