Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181928g00007 ATGGGATCCGCTCGTATCATCTCAAGTAGCATAGTCCAAGCACAAGACCAAAACGGTTACTTTTCTAAAAAATTCCATCTAACGCCATGGGATCTCCCTTACCTTCCTGTTGAAACTATTCAAAAAGGCCTTCTCTACTTCCACAACAATCCCACCAATCAAGAAACCCAATCACCAATTCAAATCATCAATCACCTCAAATCCTCATTCTCCACCACTCTCACTTTCTTTCCACCTCTCACAGGCCGTTTCATCATAACCACTAACAACGAATACGAAACCTCCGCCTATCACATCCTCTGTAACAACCAGGGAGCGCTCTTCGTCCATGCTATAGCAGACAACACAACCGTCAACGACATCCTTCAATCCAACCACGTACCCTCCCTTGTTCGTTCATTCTTCCCACTTAACGGCGTTAAGAACCACGAAGGAACATCGCAGCCGCTTCTTGCAGTGCAAGTAACTGAGTTAGTTGACGGCTTCTTCATCGGCTGCACACTCAACCACGCCGTTGCAGACGGCAGGTCATTTTGGCATTTCGTCAATTCTTGGGCCGAAATCTCACGTGGGCGTAACAAACCGTCAAAGCTACCATCACTTGAACGTGTTTTTCTAAACGGTGTTGAGCCTCCTATACAGTTCCATTTCACAAAAGAATCAGATTTGGAAGAGCAACAACCATCACCACCAGAGAGGTTCTTCAACTTCACAAAGGAGAAGATATCGCAGCTCAAAGCAAAAGTCAACGATGAAGCCGGCACGGTCAATATTTCTTCGCTGCAAGCGGTTTTGGCTTATCTTTGGCGCTCTGTGATCCGTTGCATGCGTGATTGTGACCCGCAAGAAGAGGTCTCCTACCTGTTTGCGGTGGGTGCTAGGCCGAGGTTGGTTCCGCCGCTGCCGGAGGACTATTTTGGGAATGCAGCTGTGATGGGTGGTGTGACCATGACTGCCGAGAAGCTTCTAGAAGGTGGTGTTGGGAAGTGTGCTTTTGACATGAATAAGATGATTGCTTCTTACACGGATGAGAAAGTGAGGAGTCATTGTGCTTCTTGGGTGCGAGCCCCAATATTTTTTAAGCTGCGAAGTGTGGCTAACTTCAACTCCTTGGTCACCAGCAGTTCCCCACGGTTTGATGTTTACGGTAACGATTTTGGGTGGGGGAAGCCTGTGGCCGTTCGAAGCGGCGGTGCAAACAAGCGTAACGGGAAGATTAGCGTGTTTGCTGGGGTGGAAGAAGGTAGCATTGACATTGAAGTGTGCCTTCCTTTTGTGATCTTGGAGGCCTTGGAGAATGACCCCGAGTTCATGGATGCCCCCACAATGGTTGGGAACCAACAGAGCCAACCGAAGAAAGGGGGAAAAGAAGATGAAGCAGAAGGCTCCGTCTCTTGTGCTCACGCACTCGAACTGGATCTAGTTGCCGTGGATGTTCCTGCATCGCCGAAGAAAGGCTTGAATCTCTGA 1470 0.4871 MGSARIISSSIVQAQDQNGYFSKKFHLTPWDLPYLPVETIQKGLLYFHNNPTNQETQSPIQIINHLKSSFSTTLTFFPPLTGRFIITTNNEYETSAYHILCNNQGALFVHAIADNTTVNDILQSNHVPSLVRSFFPLNGVKNHEGTSQPLLAVQVTELVDGFFIGCTLNHAVADGRSFWHFVNSWAEISRGRNKPSKLPSLERVFLNGVEPPIQFHFTKESDLEEQQPSPPERFFNFTKEKISQLKAKVNDEAGTVNISSLQAVLAYLWRSVIRCMRDCDPQEEVSYLFAVGARPRLVPPLPEDYFGNAAVMGGVTMTAEKLLEGGVGKCAFDMNKMIASYTDEKVRSHCASWVRAPIFFKLRSVANFNSLVTSSSPRFDVYGNDFGWGKPVAVRSGGANKRNGKISVFAGVEEGSIDIEVCLPFVILEALENDPEFMDAPTMVGNQQSQPKKGGKEDEAEGSVSCAHALELDLVAVDVPASPKKGLNL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181928g00007 489 MobiDBLite consensus disorder prediction 438 462 - -
Stsc181928g00007 489 Pfam Transferase family 21 438 - -
Stsc181928g00007 489 Gene3D - 219 433 IPR023213 -
Stsc181928g00007 489 Gene3D - 3 213 IPR023213 -
Stsc181928g00007 489 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181928g00007 Stsc-Chr181928 9272 10847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181928g00007 66 423 Monolignol Biosynthesis Gene Families AT5G48930 28.871 2.05e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181928g00007 - - adu:107480292 736.102