Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181922g00001 ATGGCTTCTTCCTTACCAACACACATGAAAGCTTGGACATACTCAGAATATGGCAAGAGTTCACAAGTTCTTAAGCTTGAAGTCAGTTTACCTGTTCCCGAGGTGAAGGATGATCAGGTTCTCATCAAGGTTGCTGCTGTCTCCCTTAATCCCATTGATTATAAGCGAATGGCTGCGGCTTTTAAGGGCACTGACTCTCCTCTTCCTACTATTCCAGGGTATGATGTTGCGGGTGTGGTGGTTAAAGTGGGGAATCAGGTGACTAAATTTAAGTTTGGGGATGAAGTTTTTGGTGATATCAATGAGAAAGCTTTGGACCATCCAAAAGTATATGGCTCTTTGGCAGAGTATACTGCAGTAGAAGAAAAATTGTTGGCTCACAAGCCTCAGAATCTGAGCTTTGCTGAGGCTGCTAGCCTTCCTCTAGCCATTGAGACTGCTTACGAAGGCCTTGAGCGAGCCAGGTTTTCCGCCGGAAAGTCTATCCTTGTTCTGGGAGGCGCCGGTGGAGTTGGAACTCATGTTATCCAGCTTGCCAAGCATATTTATGGTGCATCTAAGGTAGCAGCAACTTCTAGCACTAAGAAACTGGATGTTTTGAGAAAATTGGGAGCTGACTTGCCAATTGATTATACAAAGGAGAATTTCGACGAGCTTCCTGAAAAATTCGATGTGGTGTATGATGCAGTAGGAGAAACCGAGAGGGCATTTAAGGCTGTCAAAGAAGGAGGCAAGGTTGTGACAATAGTGCCACCCGGATTTTCTACTGCAATATTTTTCATACTTACTTCTGATGGCACCATGTTAGAGAAATTAACACCATATTTGGAGAGCGGAAAAATCAAGCCAATAATTGATCCCAAGAGTCCCTTTCCTTTCTCTAAGGCAGTTGAAGCGTTTTCTTATCTTGAAACAAACAGAGCCACCGGCAAAGTTGTCATCGCTCCCATACCTTGA 957 0.441 MASSLPTHMKAWTYSEYGKSSQVLKLEVSLPVPEVKDDQVLIKVAAVSLNPIDYKRMAAAFKGTDSPLPTIPGYDVAGVVVKVGNQVTKFKFGDEVFGDINEKALDHPKVYGSLAEYTAVEEKLLAHKPQNLSFAEAASLPLAIETAYEGLERARFSAGKSILVLGGAGGVGTHVIQLAKHIYGASKVAATSSTKKLDVLRKLGADLPIDYTKENFDELPEKFDVVYDAVGETERAFKAVKEGGKVVTIVPPGFSTAIFFILTSDGTMLEKLTPYLESGKIKPIIDPKSPFPFSKAVEAFSYLETNRATGKVVIAPIP 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181922g00001 318 Gene3D - 151 265 - -
Stsc181922g00001 318 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 318 IPR044626 GO:0016628
Stsc181922g00001 318 SUPERFAMILY GroES-like 5 166 IPR011032 -
Stsc181922g00001 318 Pfam Alcohol dehydrogenase GroES-like domain 38 100 IPR013154 -
Stsc181922g00001 318 Gene3D - 16 314 - -
Stsc181922g00001 318 SMART PKS_ER_names_mod 19 314 IPR020843 GO:0016491
Stsc181922g00001 318 CDD MDR_like_2 9 314 - -
Stsc181922g00001 318 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 132 285 IPR036291 -
Stsc181922g00001 318 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 159 180 IPR002364 GO:0008270|GO:0016491
Stsc181922g00001 318 Pfam Zinc-binding dehydrogenase 203 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181922g00001 Stsc-Chr181922 4229 7385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181922g00001 66 206 Monolignol Biosynthesis Gene Families AT4G37990 26.946 4.70e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181922g00001 K18980 - gmx:100817947 487.263