Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181914g00002 ATGATTCAGGAGATTAGGCATCACTTTATGTGGCATCGCCACCAGCCACCACCACCCTCGGCAGTAAGCAAGCCTCCTACGCTCACTCGTCACAGCGCCGCATCCCATCTCGTTGCCTTCGTAGCGTCGTCCCTGCGAAGTCCTCGATCGCCGTCTTCAAGCTCGCAGCCGGCTCAGCCGTTCCCACTGGTTCCTTCCTTTTCGCCTTCCCTCTGTCTCAACCATCGCAGTCGTCTTCAGAAGGGTGGTTCTCCCTCTATCTCACTTTCTGATTTTAGCATCTTTCTTTCTGCAGCTAATGTTGTTTCCGACGACAACATGTTCTTCTCATTCTTCTTTTCTGAAAATCGAAGCAAGGGGCTTCGAGTCCCCACTCACTCTTCTCCCCCAAATTCAGATGGAAACCCTAGCCTTCTCTTCTCACTGAACCTGTTGTACCAGAGAACCCTAGCTGTCGCCATTCGCCTTCATGGAGGTTGTCGTCGTTGTCAGCTCATGGAGTTCCACCACAATGGTTATTGTCCCTGCCTTCGCCCTCGCAACGGTTACTGTCCCTCCCTTTGCCCTCGCAATGTGTATGATTTGGACATTGCTTATGTGGAACCACCTACTCATCCTATAAGATTGGGTCTGGCTCTCAACTACTTTGTTTTCTACTATGAAATCCTCAACCAATCTGACAAAGCTTGCAGCATGGTTAAACAGCAGCCTTCAAGGAGTACAACATATAATCCTCTTATCACAGGTACCCCAAGAGAAGGCTTAATTGACAGAAGCAAAGTTATGATTTTGTTGTGTGATAACGACTCCAAGAGTTCAGAGGAGGTTTTTACTTTTCTAATTCGATGCTCTTATCAAGTTGTTTATGTAAAGTCAGCAAGGCAAGTAATTGACGCACTGAATGCAGAGCGACAATATATTGACATCATACTAGCTGAAGTCGACCTTCCAATAAAGAAGGGCATGAACATGCTGAAGTACATAGCACATGATAAAGAATTGTGTTGA 1008 0.4683 MIQEIRHHFMWHRHQPPPPSAVSKPPTLTRHSAASHLVAFVASSLRSPRSPSSSSQPAQPFPLVPSFSPSLCLNHRSRLQKGGSPSISLSDFSIFLSAANVVSDDNMFFSFFFSENRSKGLRVPTHSSPPNSDGNPSLLFSLNLLYQRTLAVAIRLHGGCRRCQLMEFHHNGYCPCLRPRNGYCPSLCPRNVYDLDIAYVEPPTHPIRLGLALNYFVFYYEILNQSDKACSMVKQQPSRSTTYNPLITGTPREGLIDRSKVMILLCDNDSKSSEEVFTFLIRCSYQVVYVKSARQVIDALNAERQYIDIILAEVDLPIKKGMNMLKYIAHDKELC 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181914g00002 335 PRINTS 14-3-3 protein zeta signature 216 242 IPR000308 -
Stsc181914g00002 335 PRINTS 14-3-3 protein zeta signature 189 215 IPR000308 -
Stsc181914g00002 335 Gene3D - 193 242 IPR036815 -
Stsc181914g00002 335 SUPERFAMILY 14-3-3 protein 201 236 IPR036815 -
Stsc181914g00002 335 Gene3D - 255 334 - -
Stsc181914g00002 335 ProSiteProfiles Response regulatory domain profile. 262 335 IPR001789 GO:0000160
Stsc181914g00002 335 PANTHER 14-3-3 PROTEIN 202 236 IPR000308 -
Stsc181914g00002 335 SUPERFAMILY CheY-like 260 330 IPR011006 -
Stsc181914g00002 335 Pfam 14-3-3 protein 202 268 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181914g00002 Stsc-Chr181914 10850 14745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181914g00002 253 334 Response Regulator Gene Family AT5G61380 71.951 3.09e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181914g00002 K12127 - gmx:100813917 139.428