Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181913g00007 ATGGCGGCAAGATTTGTGGGGGAAGCTCTCCTCAACTCTGCACTTGGTACTATTTACAAGATGCTGATTTCACCCTTACTTGTCAACTTCATCCAGAGAAAGAAGCTTAACCGGAAGCTGGTTGAAAAGTTGGAGACAATTCTGAAATCTGCTCAAGCTGTGATCAATGATGCCGAGCGGAGGGAGATCAAAGAGGAAGCAGTGAAGGACTGGATGGACAGGCTGAAGCATGCTGTGTACGACGCTGAAGACGTACTGGATGAAGTCACCGCCAAAGCTGCCATTCAGAAGGAGAATCCAGGTAACTCCCTGTCTTGCTATGTCAATTTGCATGATGATGGTGAGATAGCAAACAGGATGGAGGAAATAATTGATAGGATAGAGTCTATTGTGAAAGAAAAAGACACACTTGGGCTCAGAGAGATTCCTAAGGAGAACATGTCATGGAGGATCACAACATCTCTAGTTGAAAGATCTAATATATATGGCAGGGAAGAAGACAAGGAGGCCATACTGAAATTGTTGTTGGATGATGTTGACAATGGTGATGGTGATATATCTGTGATTCCCATTGTGGGCATGGGTGGGATAGGAAAGACTACTTTGGCACAATTGATTTACAACGATGATAAAGTGAAGGCGAATTTTGATTTTCGAGGTTGGGTTTGTGTGTCGGAAGAGTTTGATGTTATTAGGGTCACTAAGACTATAATTGAGGCAATAACTTCAAGTTCTTGTAACTTGAAAGATTTGAATTTACTTCAACTTGACTTAAAGGAAAGATTGTCAAGACGGAAATTCTTTGTTGTCTTGGACGATGCATGGAACGAGGATTATGATGATTGGAATAAGCTTTTAGAACCTTTTCAAAATGGTGTTAAGGGAAGTAAAATTCTCTTAACAACCAGAAGTAAAAAGGTGGCTTCTCTGGTGCAAACTGTTTCACCTTGTGAGCTAAGTTTATTGTCTGATGAAGATTGCTGGTTAGTGTTCTCAAAACATGCACGTATTTCCACCGACTCCATGGAGAATTTAACTCTAGAGAAGGTTGGCAAAGATATTGTAAAGAAGTGTGATGGATTGCCCTTAGCAGCCCAAGCCCTCGGAGGCTTATTGCGTGGAAATTCTGATGTCAAGTATTGGAACCATATATTAAAGAGTGAGATTTGGAAATTCTCTGATGATAAGATGAAAATTATTCCGGCGTTAAGAATCAGTTATTACCATCTTCCGTCATGTCTGAAAGAGTGCTTCCTTTATTGTTCTTTGTATCCCAAGGATTATGAATTTGAGAAAGATGAATTGATCTTGTTATGGATGGCTGCAAACTTTTTGCAACCAGTAGGAAGAGAGACTTTAGAAGAAGTTGGCAAGGCCTATTTTGACGAACTAATTGCGAGATCGATTTTGCAACCTCGTGGTAATGGTGAAAAGAAATTTGTGATGCATGATCTCATGCATGATTTGGCAATGATCTTTGCTAGAGACTTCTTTTTTAGGGCGGAAGAACTTGAGAATACTCTTGATGTTAATACTAAAACTCGTCATTTGTCACATAATGCCAAAGGAAACTATCCACTCTCAAAACTTTTGGGAGTATGTGACAGAGTAAAACATGCAAGAACATTTCTTGAGATCAATTTGGAGCCATGGATTCCGTTCGACATGGGAAACACACCTTGTATCTTCTTGTCACAGTTAAAGTACCTGAGAACTTTGTCGTTCAAACGCTATCCTCTAGAGTCACTGCCTGATTCAATAGGTGAGTTGATTCATCTGCGTTACTTGGATCTTTCTGAGACCAAGATTGTGACATTGCCCGAGTCATTGGGTAACTTGTACAATTTGCAGACTTTGAAGCTACTTTATTGCTCAAAACTAAAAGTGCTTCCTGCTAGCCTGAAAAATCTGGTAAATTTACGCCATCTCGATATTAGAGGGACTAGTTTGCATGAGATGCCGAAAGACATGAGCAAATTGAAAAGTTTGCAGTTTTTAAGCGACTACATTGTTGGAAAGCATGAAGATAACAAGATCAAAGAATTGGGAGCACTTGCCGGTCTACACGAATCAATTTCCATTGCCAAATTGGAGAATGTGGTTGACAGCAGTGAGGCTTCAACAGCAAGAATGTTTGATAAGAGTGGCATAAGGTCTTTGAGGTTGAGGTGGTCATCAGATACAGATGAGAAAACAGCTGATTCCCAAATAGAAAGAGAAATACTTGACAAGTTGCAGCCTCATACTAATTTGAAACAAGTAGAAATCTGGGGTTACAGGGGTACAAGATTTCCGGATTGGTTGGGAAATTCTTCCTACCACAATGTCACCACACTAACTCTGCGTGGTTGCAGGAATTGTTGTATGCTTCCTTCACTTGGACAGTTTCCCTCTTTGAAGCACCTTGAAATTTCAGATTTTGAAAGTGTGGAGATGGTGGGTACTGAGTTTTACAAAAATGATGAATCTTGTTTGGAGACACCGTTTCCAATGCTTGAAAGTCTTACATTTTCCTCAATGCGTCGCTGGAAGGAGTGGCGTTCATTGGACTCGAATCCATTTCCTCGACTTAGGCACCTTGCCATAAGGATGTGTCCGATGTTGAGAGGAGATTTGCCAAATGAACTACCATCTTTGCAATCTCTTATGATTCAGAATTGTGAGCAGTTTTGTTCTTCTATTCCAAGAGCTCCTTTACTGAGTGAGCTATCAGTTGAAGGAAAGCATCAAGTGGAGGCAGTGGTGGAGGCCATGATGAAGAAGCAGCTGACTTGCCTCACTTCTTTGTCCATCTTTTTTTGTTCCACCAGCATAGCTTTTCCAGTGAGTTGTATTCCATCATCACTACAAGAATTGAAGATATTTGAGTGTAGAAAATTAGAATTCCAAATGGATGGCCAACATCACTCGCTGCGGATACTTTCTATAAGTAAGAGCAGTGATTCAGTTACATCCTTTTCGTTGTTGGATGCCTTTCCAAATCTCGTGCGTGTTCATATCATGGGGTGTGAAAAGATGGAGTCTATTGTGGTGTCATGCTCTCTCTCCTGTCTGCGTACTTTATATGTAGACAATTGTGGGAGTTTGAAATCCGTGTCGACGCTATGGATGGCAGCACCTCAGCTACAAGAACTCTCCTTAATGGGTTATCCTGAGATGGATTTGTCTGCTACCGGGGATCATGCACACCGTAGCTTAAGATCTCTTCGCATCAGCTACTGCGAGAAACTAGTCAGCAGTGCAGCATTCATGAATTCTCAATTTCATGGGCTTACTTATCTTTGTATTGATGGTGAATGTGAGAGTGTCATGTCTCTCCCAAAGGAAGGTTTCTTGCCTACCTCACTCGAGTCTCTCAGACTGAGAGGCATGGGAAGTGTGGATACCTTGGAATGCAAGGGACTTGCCCACCTTACCTCCCTCCGACAACTAACCATTGAGGGTTGTCCCAAGTTGGAAAACATTGAGGGAGAAAAGCTGCCTGACTCTCTAATACGACTCATCATCAGAAGAAGCCCTTTGTTGGGTAAACGGTGCGAGATGAAGGAGGCACAGGTTTGGTGCAAAATTTCCCACATCCAAGGCATTCAAGTTGATGGCAGTTGGATTTGGTAA 3615 0.4158 MAARFVGEALLNSALGTIYKMLISPLLVNFIQRKKLNRKLVEKLETILKSAQAVINDAERREIKEEAVKDWMDRLKHAVYDAEDVLDEVTAKAAIQKENPGNSLSCYVNLHDDGEIANRMEEIIDRIESIVKEKDTLGLREIPKENMSWRITTSLVERSNIYGREEDKEAILKLLLDDVDNGDGDISVIPIVGMGGIGKTTLAQLIYNDDKVKANFDFRGWVCVSEEFDVIRVTKTIIEAITSSSCNLKDLNLLQLDLKERLSRRKFFVVLDDAWNEDYDDWNKLLEPFQNGVKGSKILLTTRSKKVASLVQTVSPCELSLLSDEDCWLVFSKHARISTDSMENLTLEKVGKDIVKKCDGLPLAAQALGGLLRGNSDVKYWNHILKSEIWKFSDDKMKIIPALRISYYHLPSCLKECFLYCSLYPKDYEFEKDELILLWMAANFLQPVGRETLEEVGKAYFDELIARSILQPRGNGEKKFVMHDLMHDLAMIFARDFFFRAEELENTLDVNTKTRHLSHNAKGNYPLSKLLGVCDRVKHARTFLEINLEPWIPFDMGNTPCIFLSQLKYLRTLSFKRYPLESLPDSIGELIHLRYLDLSETKIVTLPESLGNLYNLQTLKLLYCSKLKVLPASLKNLVNLRHLDIRGTSLHEMPKDMSKLKSLQFLSDYIVGKHEDNKIKELGALAGLHESISIAKLENVVDSSEASTARMFDKSGIRSLRLRWSSDTDEKTADSQIEREILDKLQPHTNLKQVEIWGYRGTRFPDWLGNSSYHNVTTLTLRGCRNCCMLPSLGQFPSLKHLEISDFESVEMVGTEFYKNDESCLETPFPMLESLTFSSMRRWKEWRSLDSNPFPRLRHLAIRMCPMLRGDLPNELPSLQSLMIQNCEQFCSSIPRAPLLSELSVEGKHQVEAVVEAMMKKQLTCLTSLSIFFCSTSIAFPVSCIPSSLQELKIFECRKLEFQMDGQHHSLRILSISKSSDSVTSFSLLDAFPNLVRVHIMGCEKMESIVVSCSLSCLRTLYVDNCGSLKSVSTLWMAAPQLQELSLMGYPEMDLSATGDHAHRSLRSLRISYCEKLVSSAAFMNSQFHGLTYLCIDGECESVMSLPKEGFLPTSLESLRLRGMGSVDTLECKGLAHLTSLRQLTIEGCPKLENIEGEKLPDSLIRLIIRRSPLLGKRCEMKEAQVWCKISHIQGIQVDGSWIW 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181913g00007 1204 PANTHER DISEASE RESISTANCE PROTEIN RP 41 857 IPR044974 GO:0006952
Stsc181913g00007 1204 Gene3D Ribonuclease Inhibitor 963 1056 IPR032675 -
Stsc181913g00007 1204 Gene3D Ribonuclease Inhibitor 1057 1171 IPR032675 -
Stsc181913g00007 1204 SUPERFAMILY L domain-like 481 901 - -
Stsc181913g00007 1204 PRINTS Disease resistance protein signature 261 275 - -
Stsc181913g00007 1204 PRINTS Disease resistance protein signature 358 372 - -
Stsc181913g00007 1204 PRINTS Disease resistance protein signature 188 203 - -
Stsc181913g00007 1204 PRINTS Disease resistance protein signature 611 627 - -
Stsc181913g00007 1204 Coils Coil 41 61 - -
Stsc181913g00007 1204 Pfam Rx N-terminal domain 21 104 IPR041118 -
Stsc181913g00007 1204 SUPERFAMILY RNI-like 853 1173 - -
Stsc181913g00007 1204 Gene3D - 145 315 IPR027417 -
Stsc181913g00007 1204 Gene3D - 321 405 IPR042197 -
Stsc181913g00007 1204 Gene3D Ribonuclease Inhibitor 555 909 IPR032675 -
Stsc181913g00007 1204 Gene3D - 406 491 IPR036388 -
Stsc181913g00007 1204 Pfam NB-ARC domain 165 407 IPR002182 GO:0043531
Stsc181913g00007 1204 CDD RX-CC_like 7 130 IPR038005 -
Stsc181913g00007 1204 FunFam Probable disease resistance protein At1g63360 407 492 - -
Stsc181913g00007 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 421 IPR027417 -
Stsc181913g00007 1204 SMART LRR_typ_2 637 660 IPR003591 -
Stsc181913g00007 1204 SMART LRR_typ_2 590 613 IPR003591 -
Stsc181913g00007 1204 Gene3D - 14 137 - -
Stsc181913g00007 1204 FunFam Probable disease resistance protein At1g61300 144 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181913g00007 Stsc-Chr181913 27441 31427 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181913g00007 185 654 WRKY Transcription Factor Family AT5G45050 23.295 6.01e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181913g00007 - - aip:107626318 1542.71