Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181913g00003 ATGGCTGCATCACTTGTGGGTGGAGCTGTTCTTTCTTCCATTTTGAATGTTGTTTTTGACAGAATGTCCTCACCTGAAGTTGCCAACTGGATCAAAGGCAAGAAGCTTACCCAGAAGCTGCTTGAAAGGCTGAAGACTACTCTTTATGCTGTTCAAGCCTTTCTCATTGATGCTGAGCAGAAGCAGATCAAGGAGAGAGCTGTGAAGGACTGGCTTGATAGTCTGAAAGATGCTATGTATGTTGCTGATGACTTGTTGGATGAAGTCTTCACCAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCTTGTCTCGTTATCTCAATTTGCAAGATAGGGAGATAGCAAATAGGATGGAGGAAGTAACTGAGAGGATAGAGTCTATTGTCAAGCAGAAAGACACTCTTGGTCTTAGAGATATTCCTAAGGAGAACTTGTCATGGAGGATCACAACATCTCTACTTGAAAGATCTGATGTATATGGCAGGGACAAAGACAAGGAGGTGATAGTGAAATTGTTGTTAGATGATGATGACACTGGTGATTTATCTGTGATTCCCATTGTTGGCATGGGTGGAATAGGAAAGACTTCTTTGGCCCAATTGGTTTACAACGATAACAGGGTGAAGGAGAATTTTGAATTTCAAGCCTGGGTTTGTGTCTCTGAAGAATTTGATGTGATGAAGGTCACCAAGCATATACTTGAGGCAATAACTATGAGTCCTTGTAACTTGAAAAATTTGGATTTACTTCAACATGATTTGAAAGAAAAATTGTCAAGGCGGAAATTCTTTGTGGTGTTGGACGATGCTTGGAATGAGAATTCTAATGAGTGGGATAGGCTTCTAAAACCTTTTCAAGATGGGGTTAAGGGAAGTAAAATTCTCATGACTACTAGAAGTAAAAAGGTGGCTTCTGTGGTGCAGACTGTTTCACCTCATGAACTAAGTTTATTGTCTGATGAAGATTGTTGGTTAGTGTTTTCAAGTCATGCACGTCTTTCAACTATTTCTATGGAGAATCCAACTCTGGAGAAAGTCGGCAGAGATATCGTAAAGAAGTGTGATGGCTTGCCCTTGGCAGCTCAAGCCCTCGGAGGCTTATTGCGTGGAAATTCTGATGTGAATGATTGGAATCATGTATTGAAGAGTGAGATTTGGGAGTTGTCTGATAACAGGATAAATGTTGTTCCAGCATTACAAATCAGTTATTATTATCTTCCTTCGTCTTTGAAAGAGTGCTTTGTTTATTGTTCTTTGTTTCCCAAGGATTATGAATTTCATAAAGGTGAACTGATCTTATTATGGATGGCAGAGAATTTCTTACAATCAGTAGGAAAAAAGACTCCAGAAGAAGTTGGCCATGAATACTTTGATGAATTGATTGCAAGATCATTTTTCCAAACTCATAGGTCTTGGGAAAATAGATTTGTGATGCATGATCTCGTGCATGATTTGGCAATGATCTTTGCTGGAGAATTCTATTTTAGAGCGGAAGAGCTTGAGAATGCAGTTGAAATTGATACTAAAACTCGTCATTTATCACATAATGCCAAAGGCAACTATCCAATGTCTAAACTTTTGGGAGTTTGTGACAGAATAAAACATACAAGGACATTTCTTGAAATCAATTTGAATTCATGGATCCCATTTAACATGTCAAACGCACCTTGTATCTTGTTGTCACAGTTGAAGTACTTGAGAGCTTTGTCGTTCGAAAACTTTCCTCTTGAGTCATTACCTGATTCAATAGGTGAGTTGATTCATTTGCGTTACTTGGATCTCTCTTGGACCGACATTGTGACGTTGCCGGAGGCATTGGGTAACCTGTACAATTTGCAAACTTTGAAGCTATTTGGATGTAAAAATCTGGAAATGCTTCCGGTTGGCATGAAAGATATTGTAAATTTGCGTCATCTTGATATTGGACAGACATGTTTGCATGAGATGCCGGAGGGCATGAGCCAATTGAAAAGTTTGCAGTTTTTAAGCGACTATGTAGTTGGGAAACGTGAAGGGAACAAGATTAAAGAATTGGGAGCACTTGCAAGTCTACACAAATCAATTTCCATTCACAAATTGGAGAATGTGGTCAACAGCTCTGAAGCTTTGGAGGCAAGAATGTTTGATAAGGATGGCATTAACCATTTGTGCTTGAGTTGGTCATCAGATAAAGATGAGAATATAGTTGATTCCCGAACAGAAAGAGATATACTTGACAAGTTACAACCTCACAGTAATTTGAAAAGCCTAGAAATGAGGGGTTTCAGGGGTACAACATTTCCAGATTGGTTGGGAAGTTCTTCCTACCACAACATCACCGTAGTATCTTTCTATGGTTGCAGGAATTGTTGTATGTTTCCTTCACTTGGACAGTTGCCCTCTTTGAAGCACCTCAGAATTTATAATTTTGAAATGCTTGAGATTGTGGGTGCTGAGTTTTATCAGAACGATCAATCTTGTTTGGAGACACCATTTCCATTGCTTGAAACTCTTTCATTTGTGTTAATGCCTTGTTGGAAGGAGTGGCATTCATTGGAGTTCCATGCATTTCCTCGACTTAGGGAGCTTACGATAAGGGAATGTCCCATGTTGAGAGGAGATTTACCCAATCATCTACCATCTTTGGACTCACTTAAGATTGAGAACTGCAAGCAGCTCATTTGTTGTCTTCCAAGAGCTCCTTTACTGCGTAAACTATCAATTGAAGGAAAGCATCAAGTGGAGGCAGTGGTGGAGGCCATTATGAAGAAGCAACTGACTTGCCTCACTTCTTTATCCATATCAGATTGTTCCTCCCACATATTGTTACCAGTGAGTCGTATCCCAGCATCACTACAAGACTTGTCGATCCGGCATTGCAGAGAATTAGAATTCCAAACGGAAGGCCAACATCACTCATTGCAGTCACTGCAAATAACCGACAGCTGTGATTCAGATACATCCTTATTGTTGTTGGATGCCTTTCCTAATCTCCACCGTGTTAATATCTCGGAATGTGAAAAGATGGAGTCTGTTGTGGTGTCATGCTCTCATTCATGTCTCCATTTTTTAGATATCATGAATTGTAGGAGTTTGAAATCCTTGTCGACGCTATGGAAGGCAGCACCTCAGTTAGAGCATCTCGCAATACGCGGTTGCCCAGAGATGGATTTGTCTGCTACAGGGGATCCAAACCGTAGCCTGAGACATCTTGACATCAGCTACTGTGAGAAACTAGTGAGCAGTGCAGCTTTGATGAATTCGCAATTTCATGGGCTTACTCATCTTCAGATTTGTGGTGAAGACAACGAGAGTGTGAAATCTTTCCCAAAGGAAGGTTGGTTGCCTGCCTCACTTGAGATTCTCAGACTGAATTACATTAAAAGTGTGGAGACGTTGGAATGCAAAGGACTTGCCCACCTCACCTCCCTCCAAACATTACAAATTTATGGATGTCACAAGTTGGAGAATATCGAGGGAGAAAAGCTGCCTGCCTCTCTAATACGACTCACCATCTTTAAAAGCCCTTTGTTGGGTAAACGGTGTGAGATGAAGGACCCACATATTTGGCCCAAAATCTCCCACATCCGCCACATTCAAACCCTCAGGCATGGGAGTTGGGACATAATGAAATTAGGTGCTTCTTCCAAGCTTGATTCACATATTCCTTTCGATAATTCAGCTACAATGCTGTTCACAGAGATGAATCTACAGCTAAACTCATCAAGACTCTTCTTAGTGGATCAAATTAAAGCTTTCCTGTGGAGCCAAAGAGATAACTTCTGTGCTCAAGGACTTGAGTTTGCTTTTGCTGCATACAATCATGTACAGTTATCGAAATACGAAAGGGTCGCATATTCAGTGATGTCATGA 3852 0.4068 MAASLVGGAVLSSILNVVFDRMSSPEVANWIKGKKLTQKLLERLKTTLYAVQAFLIDAEQKQIKERAVKDWLDSLKDAMYVADDLLDEVFTKAATQKDPGTFLSRYLNLQDREIANRMEEVTERIESIVKQKDTLGLRDIPKENLSWRITTSLLERSDVYGRDKDKEVIVKLLLDDDDTGDLSVIPIVGMGGIGKTSLAQLVYNDNRVKENFEFQAWVCVSEEFDVMKVTKHILEAITMSPCNLKNLDLLQHDLKEKLSRRKFFVVLDDAWNENSNEWDRLLKPFQDGVKGSKILMTTRSKKVASVVQTVSPHELSLLSDEDCWLVFSSHARLSTISMENPTLEKVGRDIVKKCDGLPLAAQALGGLLRGNSDVNDWNHVLKSEIWELSDNRINVVPALQISYYYLPSSLKECFVYCSLFPKDYEFHKGELILLWMAENFLQSVGKKTPEEVGHEYFDELIARSFFQTHRSWENRFVMHDLVHDLAMIFAGEFYFRAEELENAVEIDTKTRHLSHNAKGNYPMSKLLGVCDRIKHTRTFLEINLNSWIPFNMSNAPCILLSQLKYLRALSFENFPLESLPDSIGELIHLRYLDLSWTDIVTLPEALGNLYNLQTLKLFGCKNLEMLPVGMKDIVNLRHLDIGQTCLHEMPEGMSQLKSLQFLSDYVVGKREGNKIKELGALASLHKSISIHKLENVVNSSEALEARMFDKDGINHLCLSWSSDKDENIVDSRTERDILDKLQPHSNLKSLEMRGFRGTTFPDWLGSSSYHNITVVSFYGCRNCCMFPSLGQLPSLKHLRIYNFEMLEIVGAEFYQNDQSCLETPFPLLETLSFVLMPCWKEWHSLEFHAFPRLRELTIRECPMLRGDLPNHLPSLDSLKIENCKQLICCLPRAPLLRKLSIEGKHQVEAVVEAIMKKQLTCLTSLSISDCSSHILLPVSRIPASLQDLSIRHCRELEFQTEGQHHSLQSLQITDSCDSDTSLLLLDAFPNLHRVNISECEKMESVVVSCSHSCLHFLDIMNCRSLKSLSTLWKAAPQLEHLAIRGCPEMDLSATGDPNRSLRHLDISYCEKLVSSAALMNSQFHGLTHLQICGEDNESVKSFPKEGWLPASLEILRLNYIKSVETLECKGLAHLTSLQTLQIYGCHKLENIEGEKLPASLIRLTIFKSPLLGKRCEMKDPHIWPKISHIRHIQTLRHGSWDIMKLGASSKLDSHIPFDNSATMLFTEMNLQLNSSRLFLVDQIKAFLWSQRDNFCAQGLEFAFAAYNHVQLSKYERVAYSVMS 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181913g00003 1283 Gene3D - 25 133 - -
Stsc181913g00003 1283 Gene3D Ribonuclease Inhibitor 1054 1169 IPR032675 -
Stsc181913g00003 1283 Gene3D Ribonuclease Inhibitor 959 1053 IPR032675 -
Stsc181913g00003 1283 SUPERFAMILY L domain-like 896 1186 - -
Stsc181913g00003 1283 ProSitePatterns Pentraxin domain signature. 715 722 IPR030476 -
Stsc181913g00003 1283 Gene3D Ribonuclease Inhibitor 529 893 IPR032675 -
Stsc181913g00003 1283 Gene3D - 146 311 IPR027417 -
Stsc181913g00003 1283 PANTHER DISEASE RESISTANCE PROTEIN RP 41 883 IPR044974 GO:0006952
Stsc181913g00003 1283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 417 IPR027417 -
Stsc181913g00003 1283 Pfam Rx N-terminal domain 10 99 IPR041118 -
Stsc181913g00003 1283 FunFam Probable disease resistance protein At1g61300 143 311 - -
Stsc181913g00003 1283 FunFam Probable disease resistance protein At1g63360 403 488 - -
Stsc181913g00003 1283 PRINTS Disease resistance protein signature 184 199 - -
Stsc181913g00003 1283 PRINTS Disease resistance protein signature 354 368 - -
Stsc181913g00003 1283 PRINTS Disease resistance protein signature 257 271 - -
Stsc181913g00003 1283 PRINTS Disease resistance protein signature 607 623 - -
Stsc181913g00003 1283 SUPERFAMILY L domain-like 477 891 - -
Stsc181913g00003 1283 Gene3D - 402 487 IPR036388 -
Stsc181913g00003 1283 Gene3D - 317 401 IPR042197 -
Stsc181913g00003 1283 Pfam NB-ARC domain 163 403 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181913g00003 Stsc-Chr181913 13222 17891 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181913g00003 181 650 WRKY Transcription Factor Family AT5G45050 22.414 2.82e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181913g00003 - - aip:107626318 1594.33