Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181910g00001 ATGCAAATGGAAACTCTCCCACTCCTCCTCACCCTAGCAGCAGCACTATCTGCTTACTTCCTTTGGTTCAAACTGCTTTCCCACACCTTATCCGGCCCCAAGGCATGGCCATTCGTAGGGAGCCTCCCGCTCCTCTTCCAGAACCGCCACCGCGTCCACGACTGGATAGCCGACAACCTCCGCGCCACCGCCGGAGCCACCTACCAAACATGTATCATACCATTGCCTTTCTTGGCGCGCAAGCAAGGGTTCTACACCGTCACATGCCACCCAAAAAACCTCGAGCACATCCTCCGAACCCGGTTCGACAACTACCCTAAGGGCCCTAAATGGCAAACAGCATTCCACGACCTCTTAGGGCAAGGCATTTTCAACAGCGACGGCGACACGTGGCTCATGCAGCGGAAAACAGCTGCCCTAGAGTTCACTACACGAACCCTAAGGCAAGCAATGGCGCGGTGGGTGAACCGCACTATCAAGAATCGTCTATGGTGCATCCTAGACAAGGCGGCGAAGGAGAAGGTCCATGTAGACCTCCAGGACCTTCTCCTTCGCCTGACATTCGATAACATTTGCGGTCTCACTTTCGGGAAGGACCCCGAAACTCTATCACCAAATTTACCAGAAAACCCTTTCGCTGTGGCGTTCGATACCGCAACTGAGGCTACAATGCACAGATTCTTGTACCCAGGCATCGTTTGGAGGTTCCAGAAGCTTCTATGCATCGGACAAGAAAAGCGGTTAAATGAGAGTCTCAAGGTAGTTGAAACTTACATGAACGACGCCGTTTTGGACCGCAAGGAAGCCCCATCTGACGACTTGCTCTCCCGTTTCATGAAGAAGCGTGATGTTAACGGAAAACCGTTAAGCCCAACGGTTTTGCAACGGATCGTTCTGAATTTCGTTTTGGCGGGAAGGGACACGTCATCGGTGGCGCTCAGCTGGTTCTTCTGGCTCGTAATGAATCATCCCAACGTGGAGGCCAGGATTTTGTCGGAGATCGCGGCGGTTCTCAGCCAGAGCCGCGGCGGAGACCGAAGGCGGTGGGTGGAGGAGCCGCTGGACTTCGACGAGGCGGACAAGATGGTTTACCTGAAGGCAGCTCTGGCGGAGACTCTACGGTTGTACCCGTCGGTGCCTCAGGATTTCAAGCAGGCCGTCGCCGACGATGTGTTGCCAGACGGCACTGTGGTTCCGGCTGGTTCCACGGTGACGTATTCGATATACTCGGCGGGGAGGGTTGAGAGTCTTTGGGGAAAGGATTGTTTGGAGTTTAGACCGGAGCGATGGCTTTCGGTTCGTGGAGATCGGTTCGAACCGCCAAAGGATGGGTTTAAGTTCGTGGCTTTTAATGCTGGACCGAGAACTTGTTTGGGGAAGGACCTGGCTTATCTTCAGATGAAATCCGTGGCTGCGGCTGTGCTTTTAAGGTACCGGCTGTTGCCGGTTCCCGGTCACCGTGTGGAGCAGAAGATGTCACTCACTTTGTTCATGAAGAATGGGCTCAGGGTGTTCCTGGAACCAAGGAAGATTGAGGGTGTGCAGATAGAGGTTGGTGCCACACATGCATGGTGA 1575 0.5422 MQMETLPLLLTLAAALSAYFLWFKLLSHTLSGPKAWPFVGSLPLLFQNRHRVHDWIADNLRATAGATYQTCIIPLPFLARKQGFYTVTCHPKNLEHILRTRFDNYPKGPKWQTAFHDLLGQGIFNSDGDTWLMQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKAAKEKVHVDLQDLLLRLTFDNICGLTFGKDPETLSPNLPENPFAVAFDTATEATMHRFLYPGIVWRFQKLLCIGQEKRLNESLKVVETYMNDAVLDRKEAPSDDLLSRFMKKRDVNGKPLSPTVLQRIVLNFVLAGRDTSSVALSWFFWLVMNHPNVEARILSEIAAVLSQSRGGDRRRWVEEPLDFDEADKMVYLKAALAETLRLYPSVPQDFKQAVADDVLPDGTVVPAGSTVTYSIYSAGRVESLWGKDCLEFRPERWLSVRGDRFEPPKDGFKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLLRYRLLPVPGHRVEQKMSLTLFMKNGLRVFLEPRKIEGVQIEVGATHAW 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181910g00001 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Stsc181910g00001 524 SUPERFAMILY Cytochrome P450 22 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181910g00001 524 CDD CYP86A 69 502 - -
Stsc181910g00001 524 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181910g00001 524 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181910g00001 524 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181910g00001 524 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181910g00001 524 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181910g00001 524 Pfam Cytochrome P450 32 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181910g00001 524 Gene3D Cytochrome P450 27 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181910g00001 524 FunFam Cytochrome P450 24 512 - -
Stsc181910g00001 524 PANTHER CYTOCHROME P450 25 503 - -
Stsc181910g00001 524 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181910g00001 524 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181910g00001 524 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181910g00001 524 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181910g00001 Stsc-Chr181910 10278 12170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181910g00001 3 509 Cytochrome P450 AT5G58860 76.031 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181910g00001 K15401 - gmx:100788343 907.516