Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181899g00001 ATGGGTATCTGCATATCCATTGCATCTTCAGAGATTCATGGGGCCCCTAAGGAAGTTTATGGTGAGAATGTGATATCATTTGGAGCAAACAAGGTTCAAGGTGGTAATCAAGGACTATGTTCTGCTTACTCTAAACAAGGGACCAAAGGAGTGAACCAAGATGCTGCTTCTATTCACCAGGGTTATGGAATGGAAGATGGAACATTTTGTGGTGTTTTTGATGGGCATGGAAGGAATGGACGCATTGTGAGCAACATGGTTAACAGAAACTTATCTTCACTCATACTTAACCAAAAGGGTGCCTTTGAAAGGATTAATAACATAGAAAATGGTGATTCCAACACCCTAAGCAATCAGGTTGACACAGTGGAAGGTGACAATCATAAGGATGCAAACAATTTTGAGATACGGAAAGAAGCAGTTACAAGTGCTTTCAAGGTCATGGACAAGGAGATCAAGTTACAAGAGAATCTAGATTGTTCTTGCAGTGGAACAACTGCTATTGTTGGTGAAGGTCTAATCATAGCTAATTTGGGTGACTCAAGGGCAGTGTTGGGGAAAATCTGTGATGAAGAACTCATGGCCATTCAATTGACCACAGATTTGAAGCCTGGATTACCTGGTGAAGCAGAAAGAATAAGGAAGTGCAATGGTTGTGTATTTGCACTAAAGGAAGAACCACAAATCCAAAGAGTGTGGATACCAAACTGTGAGAACTCACCAGGACTTGCCATGTCTCGTTCTTTTGGAGATTTCTTGCTCAAAGAACATGGTGTCATTGCCATCCCTGATGTTACATATTACCCTCTAACATCATCTGACCAATTCATTGTTCTTGCAAGTGATGGGGTGTGGGATGTACTAAGCAACATAGAGGTTGCAACAATAGTGTGGACCACAAACAATGAAGAGGAAGCAGCAAAGAAAGTGGTAGAAGCAGCCAATGCTGCATGGAGAAGGAAGTACCCTTTTTCCAAGATTGATGATTGCACTGTGGTTTGCCTGTTCCTAAAAAACAAAAACAAAAGAAACTCAGGAATGTGGAAAGTGTAA 1053 0.4122 MGICISIASSEIHGAPKEVYGENVISFGANKVQGGNQGLCSAYSKQGTKGVNQDAASIHQGYGMEDGTFCGVFDGHGRNGRIVSNMVNRNLSSLILNQKGAFERINNIENGDSNTLSNQVDTVEGDNHKDANNFEIRKEAVTSAFKVMDKEIKLQENLDCSCSGTTAIVGEGLIIANLGDSRAVLGKICDEELMAIQLTTDLKPGLPGEAERIRKCNGCVFALKEEPQIQRVWIPNCENSPGLAMSRSFGDFLLKEHGVIAIPDVTYYPLTSSDQFIVLASDGVWDVLSNIEVATIVWTTNNEEEAAKKVVEAANAAWRRKYPFSKIDDCTVVCLFLKNKNKRNSGMWKV 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181899g00001 350 PANTHER PROTEIN PHOSPHATASE 40 335 IPR015655 GO:0004722|GO:0006470
Stsc181899g00001 350 SUPERFAMILY PP2C-like 39 339 IPR036457 -
Stsc181899g00001 350 CDD PP2Cc 40 337 IPR001932 -
Stsc181899g00001 350 Pfam Protein phosphatase 2C 128 316 IPR001932 -
Stsc181899g00001 350 SMART PP2C_4 30 335 IPR001932 -
Stsc181899g00001 350 Gene3D - 29 340 IPR036457 -
Stsc181899g00001 350 ProSiteProfiles PPM-type phosphatase domain profile. 39 337 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181899g00001 Stsc-Chr181899 1813 4857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181899g00001 1 342 PP2C-type Phosphatase Gene Family AT5G26010 47.324 1.19e-92 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181899g00001 - - aip:107605550 620.542