Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181895g00005 ATGTCACTCTTCAGAACTCTGCAGCAGGAACAAGATGGTAATCATCAAATACATTGCTCTAGAGAAAGAAGCAGAGCAGCACAGAAGATCATTCAGGAGTATTTGATGCCGTTCGTGGAGAAAGAAAAGTATCATATCTCAAGAAGTTGTAAGCTTCACCCCGACAATGATCTGTACAGAGATCAGGAACAACATAAATCCCACATTAACATAAATGAATGGCAGTGTGGTTACTGTAAGAAATTTTTCTATGAAGAGAAAAATCTTGACCAACATTTTGATAACAGACACTCCGATTTATTAAATTTGAATCAGAGCCAGTGCTTAGCAGATCTATGTGGCGCATTGCATTGTGACACTGAAATCAATTCTGGGTTGAAAAAATCAAAATGTAATCCTGCTGCTGCTGCAAGAAATAAGCATCTGTGCGAGAGCTTAGCAGATAGTTGTTTTCCTGTTAACAACGGTCCTGCAGCAAGCCGACTCCATGAATTCTTCTTGCACCAATTCTGTGATGCACACAGCTGCACTGGAAGTAGGAAACCTTTCTCCAGGGGGCGCCGGAAGAAGACAAGTGTATTCTACATCATTGCATCCGTTTTGCTTTTGATGCTGCTGCTACTTTACTATCTCTACATCTACTTATATCAGAGAGGGATGAATAAGGGAACTCAAGTATTGAGGCGAATCTCTCAAACTGGCCAAAAGAAAAAACCATCTTAA 723 0.4039 MSLFRTLQQEQDGNHQIHCSRERSRAAQKIIQEYLMPFVEKEKYHISRSCKLHPDNDLYRDQEQHKSHININEWQCGYCKKFFYEEKNLDQHFDNRHSDLLNLNQSQCLADLCGALHCDTEINSGLKKSKCNPAAAARNKHLCESLADSCFPVNNGPAASRLHEFFLHQFCDAHSCTGSRKPFSRGRRKKTSVFYIIASVLLLMLLLLYYLYIYLYQRGMNKGTQVLRRISQTGQKKKPS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181895g00005 240 ProSitePatterns Zinc finger C2H2 type domain signature. 76 97 IPR013087 -
Stsc181895g00005 240 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 98 IPR013087 -
Stsc181895g00005 240 PANTHER ZINC FINGER PROTEIN-RELATED 9 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181895g00005 Stsc-Chr181895 24995 28476 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181895g00005 16 240 C2H2 Transcription Factor Family AT5G63280 64.444 1.27e-105 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181895g00005 - - lang:109338698 409.068