Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181891g00003 ATGCTCCCAAGTCCCAACGATGTGGTTCACGCTTATCTCAACCACCACCACAGCGGCGCCGGCGCCGGCGCCGTCTCTTGCTTATGTAAATTGAATGGCAAAGAGTTGATAGCCTTGATTCGTTATTTATTGAAGTGGCTGACGAAGTATGAGAGGTTCCCTCAAGCAGGTCCCTGTCCCGAAGCTGCAGCGGTTTTGGGTTTGACGGTTTGCGATTGGGTTCCTAAACTCGAAGATGTTGTGAAATTTCTTGGTTTTGTGCTTGATGAAAACTTTTCTTCGTTGGTGTTGCATCCGGAGTTTCATGAGCTGCTAAGATTAATTGAGGAAGTGCAATATGATATACCAGTCAAGAGCAGAGTGATGGTGAATGTGTGGGCAATTGGAAGAGATCCACAATACTGGGATGATGCTGAGAGTTTTATACCAGAGAGGTTTGAAGATAGTTCTTTGGATTTCAAAGGGAACAACTTTGAGTATTTACCATTTGGGGCAGGAAGGAGAATCTGCCCTGGCATGAATTTTGGTGTGGCTGGACTTACACTTCCTTTGGCAATGTTAATGTACCATTTAAATTGGGAACTCCCCCATGGAATGAAGACTGAGGATCTGGACATGACTGAAGTCCCTGGCTTGACTATTGCAAGAAGAATTCCCTTGCGTGTCATTCCCACTGTTTACGATCCATCACTTCTTCATGATATTTAA 708 0.4477 MLPSPNDVVHAYLNHHHSGAGAGAVSCLCKLNGKELIALIRYLLKWLTKYERFPQAGPCPEAAAVLGLTVCDWVPKLEDVVKFLGFVLDENFSSLVLHPEFHELLRLIEEVQYDIPVKSRVMVNVWAIGRDPQYWDDAESFIPERFEDSSLDFKGNNFEYLPFGAGRRICPGMNFGVAGLTLPLAMLMYHLNWELPHGMKTEDLDMTEVPGLTIARRIPLRVIPTVYDPSLLHDI 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181891g00003 235 Pfam Cytochrome P450 101 211 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181891g00003 235 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 163 172 IPR017972 GO:0005506|GO:0016705
Stsc181891g00003 235 PRINTS E-class P450 group IV signature 129 147 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181891g00003 235 PRINTS E-class P450 group IV signature 154 170 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181891g00003 235 PRINTS E-class P450 group IV signature 170 188 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181891g00003 235 PANTHER OS08G0105600 PROTEIN 107 229 - -
Stsc181891g00003 235 Gene3D Cytochrome P450 103 222 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181891g00003 235 SUPERFAMILY Cytochrome P450 112 225 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181891g00003 Stsc-Chr181891 29295 30737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181891g00003 81 224 Cytochrome P450 AT1G13080 45.638 3.32e-43 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181891g00003 - K15472 aprc:113870280 191.045