Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181883g00007 ATGATTCAACCTCAAACTCATTTAAATGTAGCGGATAACAGCGGAGCACGTAAACTGATGTGTATTCGAATTCTAGGAGCTAGTAATCGACGATATGCTTATATTGGCGACATTGTTGTTGCTGTAATCAAACAAGCAGTACCAAATACGAACTTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGGACTTGTAAACAACTAAAACGTAGCAACGGTATAATAATTCAGTATGATGATAATGCTGCAGTTGTAATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATCTTTTGCGCAATCGCCCGGGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCCGAGACTAATACTTGA 372 0.371 MIQPQTHLNVADNSGARKLMCIRILGASNRRYAYIGDIVVAVIKQAVPNTNLERSEVIRAVIVRTCKQLKRSNGIIIQYDDNAAVVIDQEGNPKGTRIFCAIARELRQLNFTKIVSLAPETNT 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181883g00007 123 Hamap 50S ribosomal protein L14 [rplN]. 1 122 IPR000218 GO:0003735|GO:0005840|GO:0006412
Stsc181883g00007 123 FunFam 50S ribosomal protein L14, chloroplastic 1 122 - -
Stsc181883g00007 123 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 121 IPR000218 GO:0003735|GO:0005840|GO:0006412
Stsc181883g00007 123 Gene3D Ribosomal protein L14 1 121 IPR036853 GO:0003735|GO:0005840|GO:0006412
Stsc181883g00007 123 SMART Ribosomal_L14_2 1 122 IPR000218 GO:0003735|GO:0005840|GO:0006412
Stsc181883g00007 123 NCBIfam 50S ribosomal protein L14 1 120 IPR005745 GO:0003735|GO:0006412|GO:0015934
Stsc181883g00007 123 Pfam Ribosomal protein L14p/L23e 1 120 IPR000218 GO:0003735|GO:0005840|GO:0006412
Stsc181883g00007 123 ProSitePatterns Ribosomal protein L14 signature. 60 86 IPR019972 -
Stsc181883g00007 123 SUPERFAMILY Ribosomal protein L14 1 120 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181883g00007 Stsc-Chr181883 29627 30152 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181883g00007 8 118 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 35.652 8.69e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181883g00007 K02874 - gmx:3989333 233.032