Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc181882g00002 | ATGTTGGGTTCATCTTCTCGAAATACTGGATCGGTTGCCTCAAGGCGGGATACTCTTTCTTTTGATAATGCAAGAAGTACTTCTGGACAGTATAATGATCCGTTCAGCCGTGTGACTAGTAGTTTTGTTTCTGAAGATGTCCCTGATGCTGCGTCTGAGAAAGATCTGGGTAATGAGTATTTCAAGCAAAAAAAATATAAGGAAGCTATTGACTGCTATTCAAGAAGCATTGCCTTTTCACCCACAGCTGTAGCATATGCAAATAGAGCAATGGCCTATATCAAGCTCAGAAGATTCCAAGAGGCTGACGATGACTGTACAGAGGCCTTAAATCTTGATGATCGTTACATAAAAGCATACTCACGCCGAGCAACATCTAGAAAAGAACTTGGGAAATTTAAAGAATCCATGGAGGATGCTGAGTTTGCCTTAAGGTTGGAACCTAACAATCAAGAAATCAAAAAGCAGTATGCTGATGCCAAGTCTTTGTATGACAAAGAAATGCTTCATAAAGTATCTGGAGCTCTGAAAAGCACTGTACAGGGAACTCAAAAAGTAGGGAAATCGGACACACAAAATAATGGAGGCAGCATCCAACCCATTTCTCTTGTTACTCAAAAGTCTGGTCCAGCTAAGGGTAGTGAGCAGCAAATTCCAGCTAAAGAGTCATACTTAATGGAGGAGGTAGATAGTAAGTCTAATAAAACCATAAGCAGGGCTCAGGGACAAGAGGCAGATGGTTCTAATGCAAGCAACAATGTGCAGCATTTTAAGGGAAATCAGAAAGGTAGTAAGCAGCACATGCAAGAATCTATTCAACAGCTTGCTTCTCGTGCAGCTTCTCTAGCTACGGCTGAAGCTGCAAAGAACATAACACCACCAACTACAGCTTATCAGTTTGAGGTCTCCTGGAGAGGGTTTTCAGGTGATCGTTCTTTGCAGATTCAAGTATTAAAGGCCATATCTCCTCAACAATTACCAAAAATATTCAAAAATGCCCTCTCTACTGCCATGCTGACTGACATCATCAAGTGTGTTGCATCTTTTTTCTCGGAAGAAATGGAGCTAGCTGTCAGTTATATGGAGCATTTGACCAAGGTACCAAGATTTGACATGATTGTAATGTGCCTTCCATCAACGGATAAAGATGACTTACGCAAGATCTGGGATGAAGTGTTCTGTGGTGAGGCAACCCCGATGGAGTTTGCTGAGATTCTGGACAACCTGCGAACAAAATACTGCCTTGGGCAGTAG | 1254 | 0.4195 | MLGSSSRNTGSVASRRDTLSFDNARSTSGQYNDPFSRVTSSFVSEDVPDAASEKDLGNEYFKQKKYKEAIDCYSRSIAFSPTAVAYANRAMAYIKLRRFQEADDDCTEALNLDDRYIKAYSRRATSRKELGKFKESMEDAEFALRLEPNNQEIKKQYADAKSLYDKEMLHKVSGALKSTVQGTQKVGKSDTQNNGGSIQPISLVTQKSGPAKGSEQQIPAKESYLMEEVDSKSNKTISRAQGQEADGSNASNNVQHFKGNQKGSKQHMQESIQQLASRAASLATAEAAKNITPPTTAYQFEVSWRGFSGDRSLQIQVLKAISPQQLPKIFKNALSTAMLTDIIKCVASFFSEEMELAVSYMEHLTKVPRFDMIVMCLPSTDKDDLRKIWDEVFCGEATPMEFAEILDNLRTKYCLGQ | 417 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc181882g00002 | 417 | PANTHER | OS05G0129900 PROTEIN | 23 | 416 | - | - | |
Stsc181882g00002 | 417 | ProSiteProfiles | TPR repeat profile. | 50 | 83 | IPR019734 | GO:0005515 | |
Stsc181882g00002 | 417 | MobiDBLite | consensus disorder prediction | 179 | 213 | - | - | |
Stsc181882g00002 | 417 | SMART | tpr_5 | 50 | 83 | IPR019734 | GO:0005515 | |
Stsc181882g00002 | 417 | SMART | tpr_5 | 117 | 150 | IPR019734 | GO:0005515 | |
Stsc181882g00002 | 417 | SMART | tpr_5 | 84 | 116 | IPR019734 | GO:0005515 | |
Stsc181882g00002 | 417 | Pfam | Tetratricopeptide repeat | 54 | 82 | IPR001440 | GO:0005515 | |
Stsc181882g00002 | 417 | MobiDBLite | consensus disorder prediction | 179 | 273 | - | - | |
Stsc181882g00002 | 417 | Pfam | Tetratricopeptide repeat | 85 | 113 | IPR019734 | GO:0005515 | |
Stsc181882g00002 | 417 | Pfam | Potential Monad-binding region of RPAP3 | 293 | 382 | IPR025986 | - | |
Stsc181882g00002 | 417 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Stsc181882g00002 | 417 | MobiDBLite | consensus disorder prediction | 235 | 273 | - | - | |
Stsc181882g00002 | 417 | SUPERFAMILY | TPR-like | 44 | 162 | IPR011990 | GO:0005515 | |
Stsc181882g00002 | 417 | ProSiteProfiles | TPR repeat profile. | 117 | 150 | IPR019734 | GO:0005515 | |
Stsc181882g00002 | 417 | Gene3D | Tetratricopeptide repeat domain | 40 | 148 | IPR011990 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc181882g00002 | Stsc-Chr181882 | 3875 | 9169 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc181882g00002 | 54 | 146 | U-box Gene Family | AT3G07370 | 30.851 | 1.08e-08 | 54.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc181882g00002 | K23002 | - | gmx:100784528 | 566.229 |