Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181878g00003 ATGTATTCCCACAAAGAAAGCATGGAGGATCATCGTTACATGGAAACTGATCCAACTGGTAGATATGGCAGGGTTGGAGAAATCCTTGGAAAAGGGGCTATGAAGACAGTGTACAAAGCAATCGATGCAGTGCTCGGAATAGAAGTAGCATGGAATCAAGTCAGACTCAACGAGGCACTTCGCACGCCGGACGATTTGGAAAGGCTCTACTTAGAGGTTCATCTTCTTAGTACTCTCAATCACGAATCGATCATGCGATTCTATACTTCTTGGATTGATGTTGATAACAAAACATTCAACTTCATCACAGAGATGTTCACTTCAGGAACACTCAGAGAATACCGGAAGAAGTATAAACAAGTTGGCATTCAAGCAATAAAGAGTTGGAGTCGCCAAATTTTGCAAGGTCTAGTGTATCTACACGAACATGATCCTCCTGTAATCCATAGGGACCTCAAGTGTGATAACATATTCGTCAATGGCCATCTCGGACAAGTCAAAATCGGCGACTTGGGACTCGCCGCCATTCTGCGTGGCTCGCAGCCGGCACACAGCGTCATAGGCACCCCTGAATTCATGGCACCGGAATTATACGAAGAAGAATACAACGAACTCGTAGATGTTTACTCTTTCGGCATGTGTGTTCTTGAAATGCTTACTTCTGATTATCCCTACAGCGAATGCTCAAATCCCGCACAGATTTACAAGAAAGTCACATCCGGGAAGTTGCCGGCGTCATTCTTCCGGCTAGAAAACAAAGAAGCGCAGAGATTTATAGGCAAATGCCTGGTAGCTGCACCGGAGAGACCGTCTGCAAAGGAATTATTGCAAGATCCGTTTCTTGTGTCTGACGATCCATCATCAATGGCGAAAATTGGAATTCAGAAGCCATTTCTAAATTACAATGACATGGAGAAGCTTCAACTGCGCGACGCTTCGCCGAGAACGGAGATGTCCATCACCGGGAAGTTGAACCCGGAAGATGATACTATCTTTCTCAAAGTTCAAATTACTGATAAGGATGGTTGCAGTAGGAATATATTCTTTCCGTTCGACATTGTGACGGATACTCCAATTGATGTGGCGATGGAGATGGTGAAGGAATTGGAGATCAGTGATTGGGAGCCTTCTGAGATTGCATATATGATTGAAGCAGAGATATCAGAACTGATGCCGGATGTGAGGAAGAGTAACTGTTCAGAGAGTTGCCATGCTTTCAGTTATGAAGACGAAGATGACTATGAAGGGCCTCGCCGCCATTTCCGGTCCGGCTCTTCTTGTTCCTCCTCCCAAGAATCCATTTCCAAGGCAGATGAAATACCAAGTGGATATTACTGGCTCCATGATGATGCTCACGACGATGCAAGTTCGCGATGTTCTTCACATGGGACATATTCCAACATGAATTTTTGTCCCATGGATGATCATCATGAATACAGTGTTGCTTCTTCTACAAGAAAAGATAAACATAATCATATCATAAAGACTCATCACAAGTGTACAAGATTTTCCCCTCTTGAAGAACCAATCAGTCTAAAGCAGTGCAAAGTTTTCTTGGGCGGCGCCGCCACCGGGAGTAATGGTAAGAGAACAATGGACAACCGGAGACTGATGAGGAACAATTCCCTGATTGACATGAGGAGCCAGTTACTGCACCGGCAACTTGTTGAGGAGGTTAACAAAAGAAGGTTATTCAAGACAGTTGATGCCATTGAAAATATTGGATATCAAAACCCTTCTGATGAGATATCACGGAAGAAATCATCAGATATAAAGTCCTCAAGATGTGTCAAGTGA 1797 0.4396 MYSHKESMEDHRYMETDPTGRYGRVGEILGKGAMKTVYKAIDAVLGIEVAWNQVRLNEALRTPDDLERLYLEVHLLSTLNHESIMRFYTSWIDVDNKTFNFITEMFTSGTLREYRKKYKQVGIQAIKSWSRQILQGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPASFFRLENKEAQRFIGKCLVAAPERPSAKELLQDPFLVSDDPSSMAKIGIQKPFLNYNDMEKLQLRDASPRTEMSITGKLNPEDDTIFLKVQITDKDGCSRNIFFPFDIVTDTPIDVAMEMVKELEISDWEPSEIAYMIEAEISELMPDVRKSNCSESCHAFSYEDEDDYEGPRRHFRSGSSCSSSQESISKADEIPSGYYWLHDDAHDDASSRCSSHGTYSNMNFCPMDDHHEYSVASSTRKDKHNHIIKTHHKCTRFSPLEEPISLKQCKVFLGGAATGSNGKRTMDNRRLMRNNSLIDMRSQLLHRQLVEEVNKRRLFKTVDAIENIGYQNPSDEISRKKSSDIKSSRCVK 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181878g00003 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Stsc181878g00003 598 SUPERFAMILY Protein kinase-like (PK-like) 24 302 IPR011009 -
Stsc181878g00003 598 FunFam Probable serine/threonine-protein kinase WNK1 8 104 - -
Stsc181878g00003 598 Gene3D Phosphorylase Kinase; domain 1 7 104 - -
Stsc181878g00003 598 MobiDBLite consensus disorder prediction 583 598 - -
Stsc181878g00003 598 ProSiteProfiles Protein kinase domain profile. 23 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181878g00003 598 MobiDBLite consensus disorder prediction 411 433 - -
Stsc181878g00003 598 SMART serkin_6 23 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181878g00003 598 MobiDBLite consensus disorder prediction 579 598 - -
Stsc181878g00003 598 CDD STKc_WNK 21 281 - -
Stsc181878g00003 598 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 8 522 - -
Stsc181878g00003 598 FunFam probable serine/threonine-protein kinase WNK9 106 286 - -
Stsc181878g00003 598 Gene3D Transferase(Phosphotransferase) domain 1 106 287 - -
Stsc181878g00003 598 Pfam Protein kinase domain 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181878g00003 Stsc-Chr181878 10303 14597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181878g00003 13 589 MAP Kinase Kinase Kinase AT5G58350 58.603 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc181878g00003 Pkinase 5.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181878g00003 K08867 - gmx:100778102 870.922