Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc181874g00001 | ATGGGTTGGTTTACCAAGTTGCTTAAGGGATCCAACCATAAATCTTCGAGAGGAGAACATCGTGGGAAATATGATAATTCCAGGGATGATTTGACAGATATTGAGAGAGAAGAAATCGACCGCGCAATTGCGCTCTCTCTTTCGGAGGAAGATCAAAAGGGGAAAAAAGTTATTGAGGATGACTCTCAATCCTCAGACGATGAACAACTATGTGAACTAACTGAGGATGAAGATGAATATCCCAGTGAAGTTAAACAACATGAAGAACTAAGTGAAGATCACAAGGAGGAAGATGAATCTGTTGGCGAAGTTGAGGAAGAGGAAGATGACCATCTTAAAAAAAATCAACAGGATAAAGACAAGCATCTTGCCGAAGCGCAGCTTGAGGAAGATGAACAACTGGCCAGAGCACTTCAAGAAAGTTTGAACAATGACTCAGATAGAGCTGAAAGGGATTCTTTATTTCAACCATTTCCACACCTCTTTCCACCTGTATATAGAATCTGTGCTGGCTGCAATTCAGAGATTGGCCATGGTAGATTTTTGAGTTGCATGGGAGGTGTCTGGCATCCAGAATGTTTCTGTTGCCATGCTTGTAATTTGCCAATCACTGATTATGAGTTTTCCATGTCTGGAAATCATGGTTACCATAAATCTTGCTACAAGGAACTGCATCACCCAAGATGTGATGTTTGCAAGAACTTCATCCCACCCAATTCAGCTGGACTCATTGAGTATAGAGCACATCCTTTCTGGATGCAGAAATACTGTCCTTCACACGAGCGTGATGGAACTCCTCGTTGTTGTAGCTGCGAAAGAATGGAGTCAAGGGATACAAAGTATCTTTTGCTCGATGATGGTCGAAAGTTATGCCTAGAGTGTCTAGACTCGGCTATTATGGATACGCATGAATGCCAGCCTCTCTATCTTGAAATACAAGAATTCTATGAAGGTTTAAATATGAAAATAGAACAGCAAGTTCCAATGCTTTTAGTTGAGAGACAAGCACTCAACGAGGCCATGGAGGGAGAAAAGAATGGTCATCACCACTTACCTGAAACAAGAGGACTTTGCTTGTCGGAGGAGCAAACTGTTGCCACTATTTTAAGGAGACCAAGGATAGGGGCAGGATACCGAGTCATTGATATGATAACTGAGCCTTACAGGCTAATCCGCCATTGCGAAGTGACAGCCATACTGCTTTTGTATGGCCTTCCTAGGCTATTGACGGGGTCAATCCTGGCTCATGAGATGATGCATGGTTGGCTTAGGCTTAAAGGCTATGGCAATTTAAGGCCAGAAGTTGAAGAAGGAATTTGCCAAGTGTTAGCTCACATGTGGCTAGATTCAGAGATCTACGCGGGTTCAGGAAGCGACAGTGGATCATCGTCATCATCGGCATCATCATCATCCTCATCTTCGCCTTCCTCTTCTTCATCATCAAAGAAGGGTAAACGGTCTGACTTTGAGAAGAAACTTGGCAAGTTTTTCAAACACCAGATTGAGTCGGATCGTTCTTCGGCTTATGGAGATGGATTCAGAGAGGGGAACCAGGCTGTGCTCAAGTATGGTTTAAGAAGTACCCTTGATCATATTCGACTCACAGGAAGTTTCCCATATTGA | 1623 | 0.4313 | MGWFTKLLKGSNHKSSRGEHRGKYDNSRDDLTDIEREEIDRAIALSLSEEDQKGKKVIEDDSQSSDDEQLCELTEDEDEYPSEVKQHEELSEDHKEEDESVGEVEEEEDDHLKKNQQDKDKHLAEAQLEEDEQLARALQESLNNDSDRAERDSLFQPFPHLFPPVYRICAGCNSEIGHGRFLSCMGGVWHPECFCCHACNLPITDYEFSMSGNHGYHKSCYKELHHPRCDVCKNFIPPNSAGLIEYRAHPFWMQKYCPSHERDGTPRCCSCERMESRDTKYLLLDDGRKLCLECLDSAIMDTHECQPLYLEIQEFYEGLNMKIEQQVPMLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTVATILRRPRIGAGYRVIDMITEPYRLIRHCEVTAILLLYGLPRLLTGSILAHEMMHGWLRLKGYGNLRPEVEEGICQVLAHMWLDSEIYAGSGSDSGSSSSSASSSSSSSPSSSSSSKKGKRSDFEKKLGKFFKHQIESDRSSAYGDGFREGNQAVLKYGLRSTLDHIRLTGSFPY | 540 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc181874g00001 | 540 | FunFam | Protein DA1-related 1 | 163 | 222 | - | - | |
Stsc181874g00001 | 540 | SMART | uim | 34 | 53 | IPR003903 | - | |
Stsc181874g00001 | 540 | SMART | uim | 129 | 148 | IPR003903 | - | |
Stsc181874g00001 | 540 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Stsc181874g00001 | 540 | PANTHER | PROTEIN DA1-RELATED 2 | 3 | 540 | IPR045218 | - | |
Stsc181874g00001 | 540 | MobiDBLite | consensus disorder prediction | 12 | 32 | - | - | |
Stsc181874g00001 | 540 | MobiDBLite | consensus disorder prediction | 45 | 63 | - | - | |
Stsc181874g00001 | 540 | MobiDBLite | consensus disorder prediction | 64 | 79 | - | - | |
Stsc181874g00001 | 540 | ProSitePatterns | LIM zinc-binding domain signature. | 169 | 203 | IPR001781 | - | |
Stsc181874g00001 | 540 | SMART | lim_4 | 168 | 220 | IPR001781 | - | |
Stsc181874g00001 | 540 | CDD | LIM_DA1 | 169 | 221 | - | - | |
Stsc181874g00001 | 540 | MobiDBLite | consensus disorder prediction | 459 | 482 | - | - | |
Stsc181874g00001 | 540 | MobiDBLite | consensus disorder prediction | 45 | 120 | - | - | |
Stsc181874g00001 | 540 | Pfam | Protein DA1 | 318 | 535 | IPR022087 | - | |
Stsc181874g00001 | 540 | Coils | Coil | 87 | 107 | - | - | |
Stsc181874g00001 | 540 | Gene3D | Cysteine Rich Protein | 166 | 228 | - | - | |
Stsc181874g00001 | 540 | Pfam | LIM domain | 169 | 223 | IPR001781 | - | |
Stsc181874g00001 | 540 | ProSiteProfiles | Ubiquitin-interacting motif (UIM) domain profile. | 129 | 148 | IPR003903 | - | |
Stsc181874g00001 | 540 | MobiDBLite | consensus disorder prediction | 459 | 488 | - | - | |
Stsc181874g00001 | 540 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 196 | 254 | - | - | |
Stsc181874g00001 | 540 | Coils | Coil | 112 | 148 | - | - | |
Stsc181874g00001 | 540 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 163 | 194 | - | - | |
Stsc181874g00001 | 540 | ProSiteProfiles | LIM domain profile. | 167 | 227 | IPR001781 | - | |
Stsc181874g00001 | 540 | MobiDBLite | consensus disorder prediction | 80 | 94 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc181874g00001 | Stsc-Chr181874 | 6148 | 12063 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Stsc181874g00001 | DA1-like | 2e-104 | CL0126 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc181874g00001 | - | - | gmx:100806605 | 857.055 |