Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181864g00006 ATGTATCACGTGAAGTTCTCGTCGGCAGCGATGGTGCCGTATAAACCTCAGGGTGGTGGCGAACAAGTTGGAAGTGTTGGAGTTTTGGATGGATCAGTGATGAGGAATGCGGGACCAGCTAACTTTGGTGGAAGTGGGAAGCATCGTTTGCGATGGACATCTGATCTTCATGACCGTTTTGTGGATGCCATTACGCAACTTGGTGGACTAGATAGTGCGTACTTCTTTTCAATATTGACATTATTTATAACACATTCCGTATATAAAAAAAAAAGGATGAAAACAAAGTACTGTCAACCAGTAAAAAGTTAG 312 0.4231 MYHVKFSSAAMVPYKPQGGGEQVGSVGVLDGSVMRNAGPANFGGSGKHRLRWTSDLHDRFVDAITQLGGLDSAYFFSILTLFITHSVYKKKRMKTKYCQPVKS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181864g00006 103 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 46 73 IPR044848 GO:0003700
Stsc181864g00006 103 NCBIfam myb-like DNA-binding domain, SHAQKYF class 47 81 IPR006447 GO:0003677
Stsc181864g00006 103 SUPERFAMILY Homeodomain-like 46 82 IPR009057 -
Stsc181864g00006 103 Gene3D - 46 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181864g00006 Stsc-Chr181864 25650 26534 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181864g00006 47 99 G2-like Transcription Factor Family AT4G13640 47.541 3.13e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181864g00006 - - adu:107494193 115.546