Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc181852g00004 | ATGTCTTACTACCAATCAGCAGAAAGAATCTCCGATCGATCATGGAAGTACGATGTGTATTTTAGTTTCCTAGGCCAAGACAGCTACGGATTCAGCTCAGATTTGTATCAAGATTTCAGGAATGCTGGGATTCATGCTTTCATTGACGACGAAGACGAGGGGCAGGAGCTTCAGAGTGGAGACCAGATGACATACACAGTGGCTCAAGCAATCGAAGGTTCTAGGGTTTCGGTTGTTGTTCTGTCACAAGATGTACGCCACCAGAGAGGTCCTTTTGAAAAAATTTTTCAAAGTCATATGGATAGCTTCTCAGATGAGAGTGAGAGTGAGAAAGTTCTCGCATGGAGGGCAGCGCTCACTCAAGCTGCTAACATTGCCGGATTTGAAATCAGCACAAACAGAAATGAAGTTGAAGTTATCAGAAAGATTGTTAGTCATGTAAGGGCTCTGCTGGATTCGGAAGATGAGTTCATCAAATTAGATTATCCAGTGGGAGTACAATCTCGTAAGGAAGAGGTGATTCAACTATTACACTCTCATACAGCAGAACATGTTGTGCTAATGGGGATATGGGGGATGATAGGAGTGGGTAAAACAACCATTGCCTCCTTTGTTTATAATCAAATTCGTCATGATTTTGATGGTCCAATGTTCCTCCCAAACATTAGGGAGAAGTGGAAGACAAACAAAGTTTTTCTACAAGAAGAACTGTTGAATGGTATTTGCAAAGAAATAGAATGGATAAAAATAAGAGACATCCAATCAGGGATAACTGTAATAAGGGAAAGACTTGGCCTAAAAAAGGTGCTTGTTGTACTTGATGATGTAGATAATATAAACCAGTTGCTAGCCTTGTGCGGAAGCCGAGAATGGTTTGGTGCAGGGAGTATAATAATCATCACAACAACAGATAGACATCTGCTTCGCACCATTGGAGTTGACTACGTCTACCAAGTGAAAGAATTGGATTACAATGAATCTCTTGAACTTTTTAGCTTCAAACAGTTTGATAGAATTGCAAAATAA | 1026 | 0.4035 | MSYYQSAERISDRSWKYDVYFSFLGQDSYGFSSDLYQDFRNAGIHAFIDDEDEGQELQSGDQMTYTVAQAIEGSRVSVVVLSQDVRHQRGPFEKIFQSHMDSFSDESESEKVLAWRAALTQAANIAGFEISTNRNEVEVIRKIVSHVRALLDSEDEFIKLDYPVGVQSRKEEVIQLLHSHTAEHVVLMGIWGMIGVGKTTIASFVYNQIRHDFDGPMFLPNIREKWKTNKVFLQEELLNGICKEIEWIKIRDIQSGITVIRERLGLKKVLVVLDDVDNINQLLALCGSREWFGAGSIIIITTTDRHLLRTIGVDYVYQVKELDYNESLELFSFKQFDRIAK | 341 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc181852g00004 | 341 | SMART | till_3 | 16 | 125 | IPR000157 | GO:0007165 | |
Stsc181852g00004 | 341 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 7 | 128 | IPR035897 | - | |
Stsc181852g00004 | 341 | Pfam | NB-ARC domain | 168 | 337 | IPR002182 | GO:0043531 | |
Stsc181852g00004 | 341 | Gene3D | - | 84 | 157 | IPR035897 | - | |
Stsc181852g00004 | 341 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 17 | 337 | IPR044974 | GO:0006952 | |
Stsc181852g00004 | 341 | Pfam | TIR domain | 16 | 84 | IPR000157 | GO:0007165 | |
Stsc181852g00004 | 341 | Gene3D | - | 158 | 315 | IPR027417 | - | |
Stsc181852g00004 | 341 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 155 | 337 | IPR027417 | - | |
Stsc181852g00004 | 341 | PRINTS | Disease resistance protein signature | 187 | 202 | - | - | |
Stsc181852g00004 | 341 | PRINTS | Disease resistance protein signature | 263 | 277 | - | - | |
Stsc181852g00004 | 341 | Gene3D | - | 10 | 83 | IPR035897 | - | |
Stsc181852g00004 | 341 | ProSiteProfiles | TIR domain profile. | 15 | 151 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc181852g00004 | Stsc-Chr181852 | 11475 | 13899 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc181852g00004 | 115 | 331 | WRKY Transcription Factor Family | AT4G12020 | 31.507 | 1.15e-24 | 103 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc181852g00004 | - | - | ahf:112727939 | 387.497 |