Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181851g00004 ATGGAATTCAAGGAGTTCATAATCAGAACCTATGAGGATCAATCTGATAGAGCTCAGGTTGAAGATCTTGAGAGAAGGTGCAAGGTAGGGCCATCAGAAACCATGCTTGACTCCATGGGTGACCCCATCAGTAGGATCCGGAACAGCCCCATGTACATGATGCTGGTGGCAGAGATGGACAATGAATTGGTTGGTTTCATTCAAGGCTCTATAAAAGTGGTAACACTAAAGTGTCATCCACCAAAGGGTGTTGCAAAGGTTGGCTATGTCCTAGGCCTAAGGGTAGCCCCACAAACTAGGAGAAAAGGCATTGGTTCAAGCCTAATCCAAAGGCTAGAAGAATGGTTCAATTCCAATGATGTGGACTATGCATACATGGCCACAGAGAAAGAAAACCATGCCTCAATAAGCCTCTTCATCAAGAAATTTGGTTACACCAAGTTTAGGACCCCAGCAATACTTGTGAACCCTGTCAACAATCACCACTCATTTAGAATCTCTTCCAATATTGACATTGCCAAAATCAAGATTGACAAAGCTGAGTCTCTTTATAGAAGATTCATGGGCACCACTGAATTTTTCCCTAGTGACATTGAAAATGTGCTTAGGAATAAGCTTAGTTTGGGAACATGGGTAGCCTCTTTCAAAGGGGAAAATGTCAGTTTTGGGATTAATGGGCCTATTAATGGACAAGTCCCCAAAAATTGGGCCATGCTTAGTGTGTGGAAAAGTGGGGATATTTTTAAGCTTAGCATTGGGAGAGCTCCAAACTCTTGCTTGTTTTTTACAAAGAGTTGGAGCTTAGTGGACAAAATTTTCCCATGTTTTGGGCTATCAACTATACCTGATTTTTTCAACCCATTTGGGTTTTATTTCATTTATGGGGTTTACCATGAAGGCCCATTTTCAGGGAAGCTTGTTAGGGCCTTGTGCAAATTTGTTCACAACATGGTGTCAAAGTCCAAGGATGAGAATTGCAACAAGATCATTGTGGCTGAAGTTGGAGGAAAAGATGAAGAGCTCAACCATCATATCCCACATTGGAAATTGTTCTCCTGCCCTGACTTGTGGTGCATTAAGGCCTTGAAAACCGAAGGGAAGAACACATTCCATGAACTAGTAACTAACAACGAGCCCAGATCCCTCTTTGTAGACCCAAGAGAGGTTTAA 1170 0.4222 MEFKEFIIRTYEDQSDRAQVEDLERRCKVGPSETMLDSMGDPISRIRNSPMYMMLVAEMDNELVGFIQGSIKVVTLKCHPPKGVAKVGYVLGLRVAPQTRRKGIGSSLIQRLEEWFNSNDVDYAYMATEKENHASISLFIKKFGYTKFRTPAILVNPVNNHHSFRISSNIDIAKIKIDKAESLYRRFMGTTEFFPSDIENVLRNKLSLGTWVASFKGENVSFGINGPINGQVPKNWAMLSVWKSGDIFKLSIGRAPNSCLFFTKSWSLVDKIFPCFGLSTIPDFFNPFGFYFIYGVYHEGPFSGKLVRALCKFVHNMVSKSKDENCNKIIVAEVGGKDEELNHHIPHWKLFSCPDLWCIKALKTEGKNTFHELVTNNEPRSLFVDPREV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181851g00004 389 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 159 IPR000182 GO:0016747
Stsc181851g00004 389 CDD NAT_SF 54 125 - -
Stsc181851g00004 389 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 389 - -
Stsc181851g00004 389 Gene3D - 7 152 - -
Stsc181851g00004 389 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 7 149 IPR016181 -
Stsc181851g00004 389 Pfam Acetyltransferase (GNAT) family 44 145 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181851g00004 Stsc-Chr181851 23710 25706 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc181851g00004 Acetyltransf_1 1.5e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181851g00004 - - gmx:100799507 583.948