Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181838g00005 ATGGGAATTGGTGGAAGTGGAAGCACCTCCGCCAGCGGCAGCGATGAATGGAAGGTGGGTCCCTACTATGGAACGTTTCAAGGCGTGGCCAACTTCTATCCTCCTGAAGGTGAAGCCTATTCCTGCCATAATTGTTACCAAGGATCCAGCCTCCTTCCTGTTTATGGTGTTGTTCAGGGACACCCCATAAGAGAACGCCGTCTTCCTTGTTGTGGACTTGGTCTCGGTTGGTGCTTGTTTATATTGGGATTCTTTCTTGGGGGCATTCCCTGGTATTGTGGAACTTTCTTGCTTCTATTTACGCGGGTGGATTACCGAGAAAAGCCTGGATTCATTGCATGCTCATTTGTTTCCCTCGTAATTGTGATAGCCATTACCTTTGGCTCCAGTCATCGGCATTTTGTTTGGTGGACATGA 417 0.4844 MGIGGSGSTSASGSDEWKVGPYYGTFQGVANFYPPEGEAYSCHNCYQGSSLLPVYGVVQGHPIRERRLPCCGLGLGWCLFILGFFLGGIPWYCGTFLLLFTRVDYREKPGFIACSFVSLVIVIAITFGSSHRHFVWWT 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181838g00005 138 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 21 135 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181838g00005 Stsc-Chr181838 24491 26038 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181838g00005 22 136 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 34.807 6.14e-24 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181838g00005 - - ahf:112714307 199.134