Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181825g00001 ATGGGTTTTGAGAATGAGTGCAGCTTCGACGAAAGTGATGATATGGCGGATGCAACCGTAGATATGAATGAGGCAAATACTATAAATATTGATGCCATTGAGAAGTTGATAACAGATTTGACAAAAGAAGAAATATGGGGATTGGTGTTTGATTCAGAATACGAAGTTTGCAAGTTTTACGCCAAATATGTCAAATGTCATGGGTTTGTGTCCCAAAAAGACTTGAAGTTCCTAGATTCTAATGGAAATATTAATAAAAAAAAATTGGTTTACAACAAAGCAGGAGAAAGATATTGGAAGCACCTTAAAAGGGACAATCAGCAAAGGGAGCACAGGGCTATCACTCGTGTGAATTGCAAGGCAAGAATTCGCTTCATTCGTCACTATAGGTCATATGATGTATGA 405 0.3704 MGFENECSFDESDDMADATVDMNEANTINIDAIEKLITDLTKEEIWGLVFDSEYEVCKFYAKYVKCHGFVSQKDLKFLDSNGNINKKKLVYNKAGERYWKHLKRDNQQREHRAITRVNCKARIRFIRHYRSYDV 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181825g00001 134 Pfam FAR1 DNA-binding domain 58 126 IPR004330 -
Stsc181825g00001 134 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181825g00001 Stsc-Chr181825 17485 17889 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc181825g00001 FAR1 2.8e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181825g00001 - - ahf:112701631 206.068