Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181824g00002 ATGGCAATGAAGAAGAAGATGATGTTTTTTGCATTTGCATTTGCATGCTTAGTTTCTGGTGTTTTCTCCTATGGATCTGAGCCACTCTCTGTCCTTTCTTTCTTGGAAAACGGTGCCGTTTCGGCCAAGCCTTCTTCATCATCATACCAACCTCTCATGGTTAATCTCACTCTCATTCATGGAGCTGCTTCAACAGGAGCTGTTTGTTTGGATGGAACATTGCCGGGTTACCACTTGGACCGCGGATTTGGATCTGGCGTAAATAGCTGGCTTGTTCACTTAGAGGGAGGAGGGTGGTGTAATACTGTAAGAAACTGTGTCTACAGAAAAAATACTCGCCGCGGTTCCTCAAAATACATGGAAAGTCAAATACAATTCACAGGAATATTGAGCAATAAAGCAGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTCAAATTGAGATACTGTGATGGGGCATCTTTCAGTGGTGATAGTGAACTTGAGTCTGAACAACTTCAATTCCGAGGACAAAAAATATGGCTAGCTGCAATTGAGGAATTGATGTTCCAAGGAATGCAGACAGCAGACCAGACACTTCTATCCGGATGCTCTGCTGGCGGTCTGGCATCTCTAATACATTGCGATGAGTTCCGGAGTTTGTTTCCAGCATCTACCAAGGTTAAGTGTTTGAGTGACGCAGGGTTTTTCCTTGATGCAGTTGATGTCTCTGGGAACCGAACACTGCGTAATCTGTTTGGAGGTGTAGTTCAGTTACAGGATGTACAAAAGAACCTGCCGAAAAGTTGCCTCGACCAATTGGATCCAACTTCGTGCTTCTTCCCTCAGAATATGGTCCAGCATATTGAGACTCCATTGTTTCTACTCAATGCAGCATATGATGCCTGGCAGGTCCAAGCCAGTTTAGCCCCACCTTCAGCTGACCCGAATGGCCTTTGGAGCGATTGCAAAGCAAACCATGCGAATTGTAACTCGTCTCAGATTCAGTTCCTCCAAGACTTCAGAGATCAATTGCTAAACGAGTTGAAAGACTTCTCAAGTACACCTCAAACTGGGCTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAGGAGACATGGTTTGCTGATAACTCTCCCCTTCTTGACAACAAGCCAATTGCAATAGCTGTGGGAGACTGGTATTTTGATCGAGAAGTAGTCAAAGCTATTGACTGTGCTTATCCCTGTGACAATACTTGCCACAATCTGGTGTTTAAGTGA 1254 0.4402 MAMKKKMMFFAFAFACLVSGVFSYGSEPLSVLSFLENGAVSAKPSSSSYQPLMVNLTLIHGAASTGAVCLDGTLPGYHLDRGFGSGVNSWLVHLEGGGWCNTVRNCVYRKNTRRGSSKYMESQIQFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSELESEQLQFRGQKIWLAAIEELMFQGMQTADQTLLSGCSAGGLASLIHCDEFRSLFPASTKVKCLSDAGFFLDAVDVSGNRTLRNLFGGVVQLQDVQKNLPKSCLDQLDPTSCFFPQNMVQHIETPLFLLNAAYDAWQVQASLAPPSADPNGLWSDCKANHANCNSSQIQFLQDFRDQLLNELKDFSSTPQTGLFINSCFAHCQSERQETWFADNSPLLDNKPIAIAVGDWYFDREVVKAIDCAYPCDNTCHNLVFK 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181824g00002 417 PANTHER NOTUM-RELATED 30 413 IPR004963 GO:0016787
Stsc181824g00002 417 Pfam Pectinacetylesterase 49 397 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181824g00002 Stsc-Chr181824 4322 9030 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181824g00002 3 416 Carbohydrate Esterase AT3G62060 63.294 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181824g00002 K19882 - gmx:100786972 717.998