Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181814g00007 ATGGCAGCAATAATTGCCTTACTGGTGATGACCATAATAATGGTGTCCTTCACTTCTCTAGCAAGTGCTGCATTAAGTGTGGATTACTATCAACATACATGTCCTCAGGTAGAGTCCATCGTTTCGGGTGCTGTGTATAAGGCAGCCATGAATGATATAACTGTCCCGGCTGCTCTACTTCGGATGCATTTTCATGATTGCTTCATAAGGGGTTGTGATGGGTCTGTTCTACTGGAATCAAAAGGAAATAATAAAGCAGAAAAGGATGGACCACCCAACATCTCATTGCATGCATTCTATGTGATTGATAATGCCAAGAAAGCAATTGAAGCCGTTTGTCCGGGAGTCGTATCATGTGCTGATATTTTGGCTCTTGCTGCAAGGGATGCTGTTCATCTGTCCGGAGGACCCTATTGGGATGTGCCTAAAGGAAGAAAAGATGGAAGAATATCAAAGGCCATTGAAACAAGACAACTGCCAGCTCCAACCTTCAACATATCTCAATTACAACAAAGCTTCTCTCAGAGAGGCCTTTCCTTGGAAGATCTGGTGGCCCTCTCAGGTGGCCACACCCTGGGATTTGCTCACTGTTCATCTTTCCAAAACAGGATTCACAACTTCAGCCCCAACAAAGACGTCGACCCTTCCTTGAACCCATCCTTTGCCACCAACCTCAGAACCATATGTCCATCTCACAACAAGGCCAAAAATGCTGGTTCTCCTTTGGACTCGACCAACACCCTCTTTGACAATGCTTATTACAAGCTCATCCTCCAAGGCAAGAGCATATTCTCTTCCGATCAAGCTCTTCTCACTAATCCCAAAACAAAATCCTTGGTTTCAAAGTTTGCTAATGCCAAAAGGGACTTTGAAAATGCCTTCGTCAAGTCCATGATCAAAATGAGCAGCATCACAGGTGCAGGTGCTGGACAAGAGATCAGGCTCCATTGTAAACACGTTAGATGA 966 0.4462 MAAIIALLVMTIIMVSFTSLASAALSVDYYQHTCPQVESIVSGAVYKAAMNDITVPAALLRMHFHDCFIRGCDGSVLLESKGNNKAEKDGPPNISLHAFYVIDNAKKAIEAVCPGVVSCADILALAARDAVHLSGGPYWDVPKGRKDGRISKAIETRQLPAPTFNISQLQQSFSQRGLSLEDLVALSGGHTLGFAHCSSFQNRIHNFSPNKDVDPSLNPSFATNLRTICPSHNKAKNAGSPLDSTNTLFDNAYYKLILQGKSIFSSDQALLTNPKTKSLVSKFANAKRDFENAFVKSMIKMSSITGAGAGQEIRLHCKHVR 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181814g00007 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Stsc181814g00007 321 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 PANTHER PEROXIDASE 25-RELATED 13 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 CDD secretory_peroxidase 25 320 IPR033905 GO:0004601|GO:0042744
Stsc181814g00007 321 ProSiteProfiles Plant heme peroxidase family profile. 24 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 FunFam Peroxidase 160 301 - -
Stsc181814g00007 321 Pfam Peroxidase 47 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 FunFam Peroxidase 28 171 - -
Stsc181814g00007 321 SUPERFAMILY Heme-dependent peroxidases 25 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181814g00007 321 Gene3D Peroxidase, domain 2 160 301 - -
Stsc181814g00007 321 Gene3D - 28 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181814g00007 Stsc-Chr181814 22555 24841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181814g00007 2 321 Peroxidase AT5G42180 72.188 6.27e-174 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181814g00007 K00430 - gmx:100820056 499.975