Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181814g00002 ATGGGACTGGGACTGTTCAGGATGTTGTACTGCTGCAGTAGTAAGGCCCGTGAAATTCCGATTAGGACAGAGTCCGATTCGAGTCCTAAGCAGAAGAAAGAAGAGAGGGCGGGGCAGAGAGAGAGAGGGATAGGAGCAGTCCTAGGGAGGCCATACGTGGACATAAATAGTATGTACGAGATGAAGAAGGAGCTGGGAAGAGGGCAGTCAGGGGTGACATACCTGTGCATAGAGAGATCGACGGGGAGGGAATACGCATGCAAGAGTATATCTCGAGGGAAGGTGGTGAGGATGGATGAGATAGAAGACGTGAGGAGGGAGATAACGATACTGCAGCACTTGTCAGGGCAGCCCAACATTGTTGAGTTCCGTGGGGCCTACGAGGACAGGCAGAATGTGCACCTTGTCATGGAGCTCTGCAGCGGAGGGGAGCTCTTTGACAGGATAATAGAAAAGGGCACCTACTCCGAGAGGGAGGCTGCCCGCTTGATGAGGCAGATTGTCAACGTCGTCCATGTTTGCCACTTCATGGGAGTCATGCACAGAGACCTTAAGCCTGAGAACTTCTTGCTTGCCACCAAGGACTCCCTTGCTCCCCTTAAAGCTACTGATTTTGGTCTCTCCGTTTTCATTGAACAAGGGTACCTTGATAAAGAACAAGTCAAAAGTTTGTGGGTCTAG 681 0.5125 MGLGLFRMLYCCSSKAREIPIRTESDSSPKQKKEERAGQRERGIGAVLGRPYVDINSMYEMKKELGRGQSGVTYLCIERSTGREYACKSISRGKVVRMDEIEDVRREITILQHLSGQPNIVEFRGAYEDRQNVHLVMELCSGGELFDRIIEKGTYSEREAARLMRQIVNVVHVCHFMGVMHRDLKPENFLLATKDSLAPLKATDFGLSVFIEQGYLDKEQVKSLWV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181814g00002 226 FunFam Calcium-dependent protein kinase 1 61 144 - -
Stsc181814g00002 226 MobiDBLite consensus disorder prediction 21 40 - -
Stsc181814g00002 226 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Stsc181814g00002 226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Stsc181814g00002 226 SUPERFAMILY Protein kinase-like (PK-like) 59 215 IPR011009 -
Stsc181814g00002 226 PANTHER SERINE/THREONINE-PROTEIN KINASE 56 212 - -
Stsc181814g00002 226 SMART serkin_6 59 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181814g00002 226 Gene3D Phosphorylase Kinase; domain 1 61 144 - -
Stsc181814g00002 226 Pfam Protein kinase domain 59 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181814g00002 226 Gene3D Transferase(Phosphotransferase) domain 1 145 224 - -
Stsc181814g00002 226 ProSiteProfiles Protein kinase domain profile. 59 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181814g00002 Stsc-Chr181814 1544 2401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181814g00002 31 225 EF-hand Containing Proteins AT1G50700 64.103 3.41e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Stsc181814g00002 Pkinase 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181814g00002 K13412 - gmx:100816157 312.383