Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181814g00001 ATGGGGCAGTGCTTCAATAAATCCCAAAGCAACAGAATCCCAATCTCATATGAACACAATTCACCACCGCCACCACCACCACCGCCGCCAAACAGAAGCAGAGGAAGGGCGGCAGCAAAATCTGAGCCGAGTCCGTCATCGTCATCATTATCGTATCATGAGGGATGGATCTTAGGGAAGGGTTTGACAGACATAAATGCATTGTACAGGCTGGAGAGGGAGCTTGGAAGGGGGCAGTTCGGGGTGACGTACCTGTGCACGGAGAGGGCCACAGGAAGACAATACGCATGCAAGTCCATAGCTCGAAGGAAGCTGACCAGGAAGAAAGAGATAGATGACGTGAAGAGGGAGATCATGATCCTTCAGCATCTCACTGGGCAACCCAACATCGTGGAGTTCAAGGGTGCCTACGAGGACAGGCAGCACGTGCATTTGGTTATGGAGTTGTGCCGCGGAGGGGAACTCTTCGATAGGATCATTGCCAAGGGCACTTACTCTGAGAGGGAGGCTGCTTCAATCTTCAGACAGATCGTCAATGTCGTTCATGTTTGCCATTTCATGGGTGTCATGCATAGGGATCTCAAGCCTGAGAATTTCCTCTTGGTTAGTAGGGATCACAATTCTCCTTTGAAAGCCACCGATTTTGGTTTGTCTGTCTTCATTGAAGAAGGTTTCTTTTCCTTTCTTCCTTCTCTCT 697 0.4964 MGQCFNKSQSNRIPISYEHNSPPPPPPPPPNRSRGRAAAKSEPSPSSSSLSYHEGWILGKGLTDINALYRLERELGRGQFGVTYLCTERATGRQYACKSIARRKLTRKKEIDDVKREIMILQHLTGQPNIVEFKGAYEDRQHVHLVMELCRGGELFDRIIAKGTYSEREAASIFRQIVNVVHVCHFMGVMHRDLKPENFLLVSRDHNSPLKATDFGLSVFIEEGFFSFLPSL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181814g00001 232 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Stsc181814g00001 232 SMART serkin_6 69 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181814g00001 232 Gene3D Phosphorylase Kinase; domain 1 71 154 - -
Stsc181814g00001 232 MobiDBLite consensus disorder prediction 1 51 - -
Stsc181814g00001 232 Pfam Protein kinase domain 69 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181814g00001 232 PANTHER SERINE/THREONINE-PROTEIN KINASE 64 222 - -
Stsc181814g00001 232 Gene3D Transferase(Phosphotransferase) domain 1 155 227 - -
Stsc181814g00001 232 FunFam Calcium-dependent protein kinase 1 71 154 - -
Stsc181814g00001 232 MobiDBLite consensus disorder prediction 18 33 - -
Stsc181814g00001 232 MobiDBLite consensus disorder prediction 1 17 - -
Stsc181814g00001 232 SUPERFAMILY Protein kinase-like (PK-like) 69 224 IPR011009 -
Stsc181814g00001 232 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Stsc181814g00001 232 ProSiteProfiles Protein kinase domain profile. 69 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181814g00001 Stsc-Chr181814 259 1219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181814g00001 5 224 EF-hand Containing Proteins AT4G04720 60.633 1.69e-87 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Stsc181814g00001 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181814g00001 K13412 - qsa:O6P43_018724 302.367