Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181813g00002 ATGGAGGGGCAACAAGCAGGTAATAAACGGAGGCGCGTGTACTCGATTGAACGGAACAAAGTGGTGTTAGAAGAAGCAGTGTTTACAAGGAATTACATGAACTATTTGGTTCCGGCATTGGTGAAGATCAAGGGAGAAAGGAGCAGCCATTATTGTTGTGAGATTGAGAATGTTGTTAAGCATGAAGTGGACATGGCAATGGTGTTGTCAGCACAAGGTTTTGCATGGAGTAATGCTCTAAAATCCAAGCTTATTCAAAGGTACCAAAATGAAATAATAAGGGATGATAATAATAATAACCCTAGTTGTAGTTCAAAGTTCAATTATGTTAATAACAATAAGGACAAAGAAGAAGAAGAAGAATATGAAGATAATGGGGTCATAAATAATAATAATAGCAAGTTGAGGTGCCTAAGAAGGTTGATTCCTGGTGGAGAAGATATGTGTAATGATGAACAAATGGTTGAAGAATTAGAGAGCTATGTAACCTGTTTGAAAATGCAGGATCTCGTTACTCCAAAGGTCTTCCGGTCTTCCATGGTGTTTTCCGACAACTATTACAGAAGGCCTGCCGGCATTGCAATTGAAATGAGGCATGATTAG 603 0.3864 MEGQQAGNKRRRVYSIERNKVVLEEAVFTRNYMNYLVPALVKIKGERSSHYCCEIENVVKHEVDMAMVLSAQGFAWSNALKSKLIQRYQNEIIRDDNNNNPSCSSKFNYVNNNKDKEEEEEYEDNGVINNNNSKLRCLRRLIPGGEDMCNDEQMVEELESYVTCLKMQDLVTPKVFRSSMVFSDNYYRRPAGIAIEMRHD 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181813g00002 200 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 27 168 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181813g00002 Stsc-Chr181813 21692 24308 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181813g00002 4 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 34.091 8.76e-23 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181813g00002 - - gmx:100813719 146.362