Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181810g00003 ATGGAAAGTGATGGTACGGAGCATCTTGGCAATGATGACAACAGTGATGGTATGGAGCATCTTGTCGATGATGACAAAAGTGATGGTATGGAGCATCTTGTTCATGATAAAAGTGATGCTATGGAGCATTCTGATGATGACAGTAGTGACGATTCTAGTAGTGACAGTGGCAGTGGTAATGATGAATTACAAGAGGATCAAAGAAAAGAGATTGATGTTAGTCACAATGAAGAGGCTACCATGTTTAAGAATAAAGGTGAATTGAGTAAAGAGGAAGTTTTGAGAATGGAGTTTGACACTCACGAAAAAGCCTATGATTTTTATGTGAGTTATGCAAAGAGTGTTGGGTTTGGTGTTCGGAAAGGAGATTTGTCTCGTGATGATGATGGCAGGTTGATAAGACGAAGATTTTTTTGCAACAGGCAAGGCTTGAGGGACAAAAAACATTACATGAGAATTGATAGAAAAAGGGATCAGAAACCAGAGACCAGGACAAATTGTAAAGCAATGTTGAGTATTTACCTTGACAACCACACCTTAACATGGAGAGTGAGAACCTTTGTGAAAGACCACAACCATGAGCTAACACCTGCGGGAATTGATTACATAATGCCAACTACAACTAGTCGTCGATTAACAACCGCAAAAAAGGCACAAAGTGATGGCATCCATATACATGGGTTCCTGACATTTCAAATCATGGGTTTTATGGTTGGTCAAGCTAGGGCTTTTGCTGGAGTCGAATTCTCAAAGGACTTGTACAGTTACGTAGATAAACAAAGATGTCCTAAGATAGCTGATGGTGATGCACTTGCAGCTATTAGCTATTTGCAGGGTAAGGCAGATTCTGATCCGACGTTGTTTGCCAGGTACACCACTACAGATGATGATCAATTGGGGCACTTGTTTTGGGCCGATGGCTTAAGTCAAGTTGACTATGAGTACTTTGGGGATGTTGTTGCACTTGATACAAAATACAAAGAAAACATGTACCACAAACGCCTAGTTATCTTTTCGGGTACTAATCATCATCGACAAACTTGTATTTTTGCATGTGCTTTGCTAGCTGATGAGCGGGCTGACACATATAAATGGGCATTGGAGAATTTCTTAGATGCAATGGAGAAGAAACACCCAAGTGCAGTGGTAACTGATGATAATGAGGCCATGAGGGAAGCAATTCAGGCTGTCTTGCCAAATACTGCCCATCGGCTATGTGCTTGGCATCTTCAAAAAGGTGCAGAGGACAACATCAAGGATACTGAATTTGCTGAGGCTTTCAAGAAATCTATTTATACCAACTTTGATCCCGATGAGTTTGAGGAGTATTGGCGTAACATGATACAAAAGTTTGAGGCATATGACAGCATGTGGGCAGAGGAGACATATAAGAAGAAGGAAATGTGGGCCACTACTTACCTTCGTGATAAGTCCTATTCTGGAATAAGAGCATCATCACGATGTGAGGGCTTAAACCCATTGATGAAGAAATATATCAAGGCAAGGCACAATATACTCGAATTGGTACAACACTTTGAGCTGGCCTTGAAGGAATTTAGGAACAATGAATTGGTAGCAGAGTTCAATTCCATGTACAATGGGCCTGTTTTGACAACTGCTTTAGAATCAATTGAGCGCAAGGCTGCTAAAGTTTATACGAGGGAAATTTTCAAAGAAGTGCAGAAAGAGTTAGAAGGGTCTGCTTTACTATTTGTTGTTGGATGTGAAAACCTTTCAACTACTGCCACGTTTAAATTGTCCAAGTATGGTAAGCCTGGTTGGGAATACAAGGTGATATATGACAGAGAGTCAGAGAAATTTGAATGCCAGTGTTGCCTATGGAATACCCATGGCATTCCCTGCAGTCACATATTTTGTGTTATGATTTATGAACATATTGCAGAATTGCCTGAAAAGTTGATTCTTAAAAGATGGACTCAAGCTGCAAAGTCTTTTAATGAGCTTCCAGATGAAGAAGACGAGGTGAACGATAAAAAGTTCCTGTTTCGTTACGGTGCATTATGTGCTGCAAGTAATTGGATGTCATTTCTGGCAGCAAGAAAGTTGCAAAATTTTCTTGAAACAAAAGATGAAATTTATAGAATCACAGCTAAGCTAGAGCATAAAGGATGTATGGTGGATACCAATTCATTTTCCTTACCCAGGAATACCATGGGTGACACAACCACTCATAAGAATGATAAGAAGCGGCGTCGTTGCAAAACCTGCAACAAGATGGGTCATACAAAGAAAACTTGTTCAAGGGCGAAGAACAAAAGGTCTCGTCGTCTGGAAGGTGATCTCAGTCCGTCTTCAATGTCGGATAATCCTCGAAATGGAGGTCAAACCACAAATAGCACAGTGGATCCTCCAAATGCAGGTGCTGCAACACATAACACTGTGGATGATCCTCCAAATGCAGGTCCTGCAACAAATAACGAGGTAGGGCACCCTCCAACAGACCCATCTACTGCCATGACACAATCGCTAGCCGCGAATCATGCTGCTGCCGCCTCTCGTTTTGGGGTATGGGGACCCCAATTTCTTCTTCCTGGTCCTGGTCAACCTTGTTTTGCTGCAAATATAGGCCAGCAATACTATCTTGCAAATCAAGGTGCTAGATATTATCCCCTTGCTCCAGCTCAACAGCAATTTCTTAGACCGCAAGGTTTAGTGCAGCGGTTTGTTCCTCAAGGGGTATTTCCCCAGCAATATGTCGGTGGTCCCGAACTTCAACCCCAAGAGTTAGCCCAACAAAGACGTGCCTTAGCCCAACAAAGACGTGCCAAAGCTCGTGCTAATCGGTGA 2808 0.4202 MESDGTEHLGNDDNSDGMEHLVDDDKSDGMEHLVHDKSDAMEHSDDDSSDDSSSDSGSGNDELQEDQRKEIDVSHNEEATMFKNKGELSKEEVLRMEFDTHEKAYDFYVSYAKSVGFGVRKGDLSRDDDGRLIRRRFFCNRQGLRDKKHYMRIDRKRDQKPETRTNCKAMLSIYLDNHTLTWRVRTFVKDHNHELTPAGIDYIMPTTTSRRLTTAKKAQSDGIHIHGFLTFQIMGFMVGQARAFAGVEFSKDLYSYVDKQRCPKIADGDALAAISYLQGKADSDPTLFARYTTTDDDQLGHLFWADGLSQVDYEYFGDVVALDTKYKENMYHKRLVIFSGTNHHRQTCIFACALLADERADTYKWALENFLDAMEKKHPSAVVTDDNEAMREAIQAVLPNTAHRLCAWHLQKGAEDNIKDTEFAEAFKKSIYTNFDPDEFEEYWRNMIQKFEAYDSMWAEETYKKKEMWATTYLRDKSYSGIRASSRCEGLNPLMKKYIKARHNILELVQHFELALKEFRNNELVAEFNSMYNGPVLTTALESIERKAAKVYTREIFKEVQKELEGSALLFVVGCENLSTTATFKLSKYGKPGWEYKVIYDRESEKFECQCCLWNTHGIPCSHIFCVMIYEHIAELPEKLILKRWTQAAKSFNELPDEEDEVNDKKFLFRYGALCAASNWMSFLAARKLQNFLETKDEIYRITAKLEHKGCMVDTNSFSLPRNTMGDTTTHKNDKKRRRCKTCNKMGHTKKTCSRAKNKRSRRLEGDLSPSSMSDNPRNGGQTTNSTVDPPNAGAATHNTVDDPPNAGPATNNEVGHPPTDPSTAMTQSLAANHAAAASRFGVWGPQFLLPGPGQPCFAANIGQQYYLANQGARYYPLAPAQQQFLRPQGLVQRFVPQGVFPQQYVGGPELQPQELAQQRRALAQQRRAKARANR 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181810g00003 935 Coils Coil 916 935 - -
Stsc181810g00003 935 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 85 677 IPR031052 GO:0006355
Stsc181810g00003 935 MobiDBLite consensus disorder prediction 734 758 - -
Stsc181810g00003 935 Pfam MULE transposase domain 319 412 IPR018289 -
Stsc181810g00003 935 ProSiteProfiles Zinc finger SWIM-type profile. 596 632 IPR007527 GO:0008270
Stsc181810g00003 935 MobiDBLite consensus disorder prediction 1 44 - -
Stsc181810g00003 935 MobiDBLite consensus disorder prediction 767 794 - -
Stsc181810g00003 935 MobiDBLite consensus disorder prediction 1 78 - -
Stsc181810g00003 935 MobiDBLite consensus disorder prediction 721 825 - -
Stsc181810g00003 935 Pfam FAR1 DNA-binding domain 106 196 IPR004330 -
Stsc181810g00003 935 MobiDBLite consensus disorder prediction 61 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181810g00003 Stsc-Chr181810 11067 14786 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc181810g00003 MULE 1.8e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181810g00003 - - adu:107477751 1628.99