Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181803g00003 ATGATGGAAGCTGAAAACCTGGCTAGGTTGAGGGAGTCCCAGACACCATTATTAGGGGGAGAAAACCCGGAGTTGCATCCTTCGGATTTTACTGGGGTCACTCCTAAGAGAAAAGAAGTTCAGACCCCTAATCCAATGTTGACTCCCTCTGCAACTCCTGGAGGTGCAGGGCTCACTCCAAGAATTGGCATGACACCTGCAAGAGATGGTTATGCTAGCATGACACCAAGGGGAACTCCTCTCAGGGATGAGCTACGTATTAATGAGGATGTGGATATGCATGAGCGCGCCAAACTTGAGCTACAAAGAGCTGAACTAAGACGAAGTTTGCGTTCTGGTTTAGGAAGCCTTCCACAGCCCAAAAATGAGTACCAGATTGTCATGCAGCCCATTCCAGAAGATGCTGAAGAACCTGAGGAGAAGATTGAAGAGGACATGTCTGATAGAATAGCTAGAGAAAAAGCAGAAGAAGAGGCAAGGCAACAGGCATTACTAAGGAAACGATCAAAAGTCCTTCAAAGGGAACTTCCTCGGCCTCCAGCTGCCTCATTGGAGCTTATAAGAAATTCTTTAATCAGAGCTGACGAGGACAAGAGTTCCTTTGTTCCACCAACCTCTATTGAGCAAGCTGATGAGATGATAAGAAGGGAGCTTCTTGCCTTGCTGGAGCATGACAATGCTAAGTATCCGCTTGACGAGAAAGTAACTAAGGAGAAAAAGAAAGGATCTAAGCGTGCTGTAAATGAGCCTGTTGTTCCTGTCATAGAAGAATATCAGGAAGAGGAGATGAAAGATGCTGATAAGTTGATAAAAGATGAGGCCCATTATCTTCGTGTAGCACTGGGACATGAAAACGAACCCCTTGAAGAATTCATTGAAGCACACAGGACTAGCCTGAACGATCTCATGTTCTTTCCAACCCGCAATGCCTATGGTCTTTCAAGTGTTGCTGGAACCACGGAAAAGCTGGCAGCTTTGCAGAACGAGTTTGAGAATGTGAGGAAAAAGTTGGACAATGGCAAGGAGAAAATTGTAAAGCTTGAGAAGAAGGCAATACTCCTCACTCAAGGCTATGAGATGAGAGCAAAAAACAGCCTTTGGCCACAAATTGAGTCCACTTTCAAGCAAATGGACATAGCTGCAACCGAATTAGAATGCTTTGAAGCTTTGCAAAAGCAGGAGACGTTAGCTGCATCCCACAGGATAAACGAGCTACGGGAGGAAGTACAGAAGCAAAAGGAACTTGAGAGAACTTTGCAACATAAGTATGGGAATCTTATGGAAGAGTTGGAAAGGATACAAAATGTCATGGAACAATACAGGGTACAAGCAAAACAGCAAGAAGAAATCGAGGCAAACAATCGCGCTAACGAATCAACAGAGACTGATGCTGACAAAACTGGTGCACAGGATTCAGAGAATTCTAAAGCTGGGCCTCACGCAGAAGAAAATGAAACTTCCATAGCAACTGATCTATCTCGTGATGAAACTGAAACCGCCATGCAAGACCAGATTACCGCTAGCCAGAACAACGACATGGATGTGGATTCTGATATAAAGCAAACAACAGATGACCCTAATGTGAAACTGCCAGATGCTACGCATGCTGCCGAGGTTGACACGGGAAAAATGGAAGCTACCATAACTGATGGTGACATTGATAACAGTAAGACTGCATTGGACAAGGGTGCTACAGTAGGAAATGAGGTGGAGAATGATGTAGCTATGGATGCTGAAAACTCACATGAGGATGATAGCACACCAGAGAAAACCACTGCTTCTGATGAAGGGGAAAAGACGCAAGTTGCTGATGGCAATTAA 1821 0.447 MMEAENLARLRESQTPLLGGENPELHPSDFTGVTPKRKEVQTPNPMLTPSATPGGAGLTPRIGMTPARDGYASMTPRGTPLRDELRINEDVDMHERAKLELQRAELRRSLRSGLGSLPQPKNEYQIVMQPIPEDAEEPEEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSLIRADEDKSSFVPPTSIEQADEMIRRELLALLEHDNAKYPLDEKVTKEKKKGSKRAVNEPVVPVIEEYQEEEMKDADKLIKDEAHYLRVALGHENEPLEEFIEAHRTSLNDLMFFPTRNAYGLSSVAGTTEKLAALQNEFENVRKKLDNGKEKIVKLEKKAILLTQGYEMRAKNSLWPQIESTFKQMDIAATELECFEALQKQETLAASHRINELREEVQKQKELERTLQHKYGNLMEELERIQNVMEQYRVQAKQQEEIEANNRANESTETDADKTGAQDSENSKAGPHAEENETSIATDLSRDETETAMQDQITASQNNDMDVDSDIKQTTDDPNVKLPDATHAAEVDTGKMEATITDGDIDNSKTALDKGATVGNEVENDVAMDAENSHEDDSTPEKTTASDEGEKTQVADGN 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181803g00003 606 Coils Coil 402 450 - -
Stsc181803g00003 606 MobiDBLite consensus disorder prediction 499 516 - -
Stsc181803g00003 606 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 437 IPR047242 GO:0000398|GO:0000974
Stsc181803g00003 606 MobiDBLite consensus disorder prediction 1 81 - -
Stsc181803g00003 606 MobiDBLite consensus disorder prediction 35 49 - -
Stsc181803g00003 606 MobiDBLite consensus disorder prediction 575 597 - -
Stsc181803g00003 606 MobiDBLite consensus disorder prediction 573 606 - -
Stsc181803g00003 606 MobiDBLite consensus disorder prediction 446 532 - -
Stsc181803g00003 606 Coils Coil 316 350 - -
Stsc181803g00003 606 MobiDBLite consensus disorder prediction 451 480 - -
Stsc181803g00003 606 Pfam pre-mRNA splicing factor component 42 288 IPR021786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181803g00003 Stsc-Chr181803 27924 32958 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181803g00003 1 459 MYB-Related Transcription Factor Family AT1G09770 65.302 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181803g00003 K12860 - gmx:100790369 776.163