Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181798g00002 ATGATAGCATTGCCAAACGGGGGTGCAGAGAAAGATGCCTCAGAAAATCTGTCACTAGCAGGAGATGGCTTTGATACAGTCGTCAAGGCAAAAACAGCCGTTGAAGCCTCATGCCCTGGCGTTGTTTCTTGTGCAGACATTTTGGCTCTTGCTACCAGAGATGTTATAGGCTTGCTTGGTGGCCCTTCATACAGCGTAGAACTTGGACGCAGAGATGGCCTTGTTTCTAAAGCCTCAGATGTGAACTCTAACCTTCCAAAAGCAGGTTTCAACCTTAACCAACTAAACACAATGTTCTCAAAACACAACCTCACCCAAACCGACATGATTGCACTCTCCGGAGCCCACACCATTGGCTTCTCACACTGCAACCAATTCTCAAACCGTTTATACTCCTTCCCATCATCCTCACACGTGGACCCCACAATGAACCCAAGCTATGCCCAACAACTTACTTCACAGTGCCCTCAAAGCGTTAACCCAAGTGTGGTCGTAGCTCTTGACCCCCAAACTTCCTTCACTTTTGATAACTTGTATTACAAGAACTTGGTTAACGGCCAGGGGATGTTGAGTTCCGACCAGGTTCTGTTTACGGACTCGAGGTCACAGTCGACCGTGGTCGATTTCGCGAATAATCCCAACGACTTCACGGCGGCCTTTGTTACGGCCATGAGGAAGCTTGGAAGGGTGGGTGTCAAGACTGGTAATCAGGGAGAGATTAGAAGAGACTGTACAACATTCAATTCATAA 750 0.4773 MIALPNGGAEKDASENLSLAGDGFDTVVKAKTAVEASCPGVVSCADILALATRDVIGLLGGPSYSVELGRRDGLVSKASDVNSNLPKAGFNLNQLNTMFSKHNLTQTDMIALSGAHTIGFSHCNQFSNRLYSFPSSSHVDPTMNPSYAQQLTSQCPQSVNPSVVVALDPQTSFTFDNLYYKNLVNGQGMLSSDQVLFTDSRSQSTVVDFANNPNDFTAAFVTAMRKLGRVGVKTGNQGEIRRDCTTFNS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181798g00002 249 Pfam Peroxidase 9 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181798g00002 249 Gene3D Peroxidase, domain 2 86 227 - -
Stsc181798g00002 249 PANTHER - 1 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181798g00002 249 CDD secretory_peroxidase 5 244 IPR033905 GO:0004601|GO:0042744
Stsc181798g00002 249 FunFam Peroxidase 86 227 - -
Stsc181798g00002 249 ProSitePatterns Peroxidases proximal heme-ligand signature. 108 118 IPR019793 -
Stsc181798g00002 249 PRINTS Haem peroxidase superfamily signature 168 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181798g00002 249 PRINTS Haem peroxidase superfamily signature 108 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181798g00002 249 PRINTS Haem peroxidase superfamily signature 60 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181798g00002 249 PRINTS Haem peroxidase superfamily signature 42 59 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181798g00002 249 PRINTS Plant peroxidase signature 107 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181798g00002 249 PRINTS Plant peroxidase signature 166 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181798g00002 249 PRINTS Plant peroxidase signature 222 235 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181798g00002 249 PRINTS Plant peroxidase signature 22 35 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181798g00002 249 PRINTS Plant peroxidase signature 41 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181798g00002 249 PRINTS Plant peroxidase signature 182 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181798g00002 249 PRINTS Plant peroxidase signature 60 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181798g00002 249 SUPERFAMILY Heme-dependent peroxidases 8 248 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc181798g00002 249 Gene3D - 7 248 - -
Stsc181798g00002 249 ProSiteProfiles Plant heme peroxidase family profile. 1 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181798g00002 Stsc-Chr181798 3201 5575 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181798g00002 1 248 Peroxidase AT5G14130 63.306 3.30e-109 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181798g00002 K00430 - gmx:100812082 381.719