Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181793g00004 ATGGCAACTCATGTAATAACGAAGACACGATGGGGGTTTTATGAGGAATGTGTGCAACTCAATAAGGAAAACGATGTTGTTCACCCTCAACTTCAATCTCAAAGAATGTGGGTGTTTACATTGGCCTCCGGCAATTTGGGCAAAGCAGGGGAACAACTAGGTTTTCATCTCAACTTTCTCATCCCACTCAGCTTCCCTCTCTTGCGCAACATACGGCTCAGATATCTGCCTCTCTCTTTCTCAAGTGAGTCTACACCGCGGTTCAGTTCCATCTCGCGCACACCGCAGTCAAGCTTAGCTCTCGTTGCAAAGATGTACACGTCAAGGAGGAAGATCCACAAAGATAAGGATGTTGAGCCAACTGAATTTGAAGAGTCTGTTGGACAGGCTTTGTTTGATCTTGAAAATACCAATACAGAGCTGAAAAGTGAACTGAAAGATTTATACATAAATTCAGCTGTCCAAGTTGATGTTTCTGGGGGGCGAAAGGCTGTTGTTATCCATGTCCCCTTCAGATTAAGGAAAGGTTTCCGGAAGATTCATGTTAGACTTGTTAGAGAGCTTGAGAAGAAGTTCAGTGGCAAGGATGTAGTCTTCATTGCCACCCGTAGGATATTGAGGCCACCAAAGAAAGGATCCGCAGTTCAGCGCCCCCGCAACCGTACACTCACCGCTGTGCACGAGGCAATGCTTGAGGATATTGTATTGCCTGCTGAGATCGTTGGGAAGCGTGTTAGGTATCGTGTGGATGGGTCCACAATCATGAAGGTTTTCTTGGATCTCAAGGAACGAAACAACACTGAGTACAAGTTGGAGACTTTTGCTGCAGTATACAGGAAGCTTTCAGGCAAAGATGTGGTGTTTGATTACCCTGCACAAGAGGCATAG 888 0.4572 MATHVITKTRWGFYEECVQLNKENDVVHPQLQSQRMWVFTLASGNLGKAGEQLGFHLNFLIPLSFPLLRNIRLRYLPLSFSSESTPRFSSISRTPQSSLALVAKMYTSRRKIHKDKDVEPTEFEESVGQALFDLENTNTELKSELKDLYINSAVQVDVSGGRKAVVIHVPFRLRKGFRKIHVRLVRELEKKFSGKDVVFIATRRILRPPKKGSAVQRPRNRTLTAVHEAMLEDIVLPAEIVGKRVRYRVDGSTIMKVFLDLKERNNTEYKLETFAAVYRKLSGKDVVFDYPAQEA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181793g00004 295 ProSitePatterns Ribosomal protein S7e signature. 183 196 IPR000554 GO:0003735|GO:0005840|GO:0006412
Stsc181793g00004 295 Coils Coil 131 151 - -
Stsc181793g00004 295 PANTHER 40S RIBOSOMAL PROTEIN S7 105 294 IPR000554 GO:0003735|GO:0005840|GO:0006412
Stsc181793g00004 295 Pfam Ribosomal protein S7e 111 290 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181793g00004 Stsc-Chr181793 28688 31814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181793g00004 105 295 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 80.105 1.88e-112 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181793g00004 K02993 - gmx:100499757 347.436