Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181793g00003 ATGAAAGAGACACTAAGGTTATATCCACCTTCTCCACTTGGAGTTCATCGTGAATTCACAGATGATTGCATTTTAGGTGGATACCAAATTAAGCTAGGAACTCGACTAGTTACAAATCTTTGGAAAATCCACACCGACTCTTCTGTCTGGTCAGATCCTTTAGAATTCAAGCCAGAAAGGTTCCTCACAACTCATAAAGACACTGATGTTAAGGGTCATAATTTCGAGTTGTTGCCATTTGGAAGTGGTAGAAGGGTGTGTCCGGCGATATCCTTTGGCTTTCAAATGGTTCATTTTATTCTGGCTAACTTCTTGCATTCCTATGAGATCTTGAATCCTTCCCCTGAACTAGTTGACATAGATGGAACACTTGGAATCACCCATGTCAAAACTACTCCACTTGAGATATTAGTTAAACCGATAGATGGAACACTTGGAATCACCCATGTCAAAACTACTCCACTTGAGATATTAGTTAAACCGTGTCTGGTTCCTAGTTGTTATGATACTGTAATAATATCAGTTTTGGCACATAGTCCTTGGTGTATTGTTGTTTTCCATATAGTTGATCCGAATGGACTATGGAACATAAAAAGAGAAAGAAGTCAGATTTATATTAATGAAAATCATTGGCATTAA 639 0.3787 MKETLRLYPPSPLGVHREFTDDCILGGYQIKLGTRLVTNLWKIHTDSSVWSDPLEFKPERFLTTHKDTDVKGHNFELLPFGSGRRVCPAISFGFQMVHFILANFLHSYEILNPSPELVDIDGTLGITHVKTTPLEILVKPIDGTLGITHVKTTPLEILVKPCLVPSCYDTVIISVLAHSPWCIVVFHIVDPNGLWNIKRERSQIYINENHWH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181793g00003 212 Pfam Cytochrome P450 2 124 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181793g00003 212 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 80 89 IPR017972 GO:0005506|GO:0016705
Stsc181793g00003 212 Gene3D Cytochrome P450 1 139 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181793g00003 212 PANTHER CYTOCHROME P450 82C3-RELATED 1 140 - -
Stsc181793g00003 212 SUPERFAMILY Cytochrome P450 1 140 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181793g00003 212 PRINTS E-class P450 group I signature 39 63 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181793g00003 212 PRINTS E-class P450 group I signature 77 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181793g00003 212 PRINTS E-class P450 group I signature 87 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181793g00003 Stsc-Chr181793 27521 28159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181793g00003 1 140 Cytochrome P450 AT4G31950 53.191 5.51e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181793g00003 - - gmx:100778056 222.631