Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc181782g00002 | ATGAAAGGAGAGTATGTAGAACACCACCACCTTCCAAAGAGTGAAGCACAAAACATGTTCTCAAAGCTTCACCACCAATCACCGCCTCATCAACAGCATCCGTTTTCTCTTCACAATCCATTCCAACATTTCTCAAGGGATCAATGCCAGCCCTCTGCCACGCCGGAAGAAGATAGCCATGGCGGCGGAGGTGTAGGCGGCGCCGCCAGTTCTCAGAAGCCGAACTCGTCCGGCGACGGAGCAACCATAGAGGTTGTAAGGAGGCCAAGAGGCCGCCCGCCGGGGTCCAAGAACAAGCCCAAACCGCCAGTGATCATAACGCGTGAGCCCGAGCCCGCCATGAGTCCGTACATTCTAGAAGTTTCTAGCGGAAACGACGTCGTTGAAGCGTTAGCGAGGTTCAGTCGGAGGAGGAACATGGGGATTTGCGTCCTTAATGGATCCGGAACCGTTGCTAACGCCACTCTACGTCAGCCCGGAGCAGCTCCCGGAGCCACCGTTACGTTTCACGGCCGATTCGATATCTTATCTGTTTCCGCCACGTTTCTTCCGCAGTCGTCGTCGCAGTCGGTTCCTACCGCCTTCGCCATCTCGCTTGCCGGACCGCAGGGGCAGATCGTCGGAGGACACGTCGCCGGAGGACTTACGGCCGCCACGACGGTGTTTGTTGTGGCGGCTTCGTTCAACAATCCTTCGTTTCATAGGCTGCCGCCGGAGGACGATGCGAGGAACGAGGTTTCCGGAGGGGAGGGTCAGTCGCCGGCGGTGTCTGGTGGCGGTGGTGAGAGTGGGCATGGTCAGGCGGTGGATTCGTGTGGGATGTCGATGTATAGCGGCGTTCATCACTTGGCGGGGGCGGCGTCGTCCGATGTGATATGGACTCCGACGGCAAGGGCGCCACCACCTCCTTACTGA | 915 | 0.5847 | MKGEYVEHHHLPKSEAQNMFSKLHHQSPPHQQHPFSLHNPFQHFSRDQCQPSATPEEDSHGGGGVGGAASSQKPNSSGDGATIEVVRRPRGRPPGSKNKPKPPVIITREPEPAMSPYILEVSSGNDVVEALARFSRRRNMGICVLNGSGTVANATLRQPGAAPGATVTFHGRFDILSVSATFLPQSSSQSVPTAFAISLAGPQGQIVGGHVAGGLTAATTVFVVAASFNNPSFHRLPPEDDARNEVSGGEGQSPAVSGGGGESGHGQAVDSCGMSMYSGVHHLAGAASSDVIWTPTARAPPPPY | 304 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc181782g00002 | 304 | MobiDBLite | consensus disorder prediction | 233 | 267 | - | - | |
Stsc181782g00002 | 304 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 113 | 241 | - | - | |
Stsc181782g00002 | 304 | MobiDBLite | consensus disorder prediction | 23 | 108 | - | - | |
Stsc181782g00002 | 304 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 60 | 273 | IPR014476 | GO:0003680 | |
Stsc181782g00002 | 304 | MobiDBLite | consensus disorder prediction | 23 | 55 | - | - | |
Stsc181782g00002 | 304 | ProSiteProfiles | PPC domain profile profile. | 111 | 249 | IPR005175 | - | |
Stsc181782g00002 | 304 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 116 | 230 | IPR005175 | - | |
Stsc181782g00002 | 304 | Gene3D | - | 115 | 247 | - | - | |
Stsc181782g00002 | 304 | FunFam | AT-hook motif nuclear-localized protein | 115 | 247 | - | - | |
Stsc181782g00002 | 304 | CDD | DUF296 | 116 | 225 | IPR005175 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc181782g00002 | Stsc-Chr181782 | 27727 | 29692 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc181782g00002 | 79 | 302 | AT-hook Motif Nuclear Localized (AHL) Family | AT5G49700 | 65.665 | 2.80e-97 | 286 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc181782g00002 | - | - | adu:107460948 | 501.13 |