Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181769g00002 ATGGCAGAAACCCTGAACAACTCTGTTTCTGCATCAATGCTTTCCCTTTCACCACCAAAACAAGAGCAAGAATCTGCTATGATGAACATGGAAGTGGAGACTAGTGATGCAGCCACACCACCAACACCACAACCACCACAACCAGTAGCAGTAGCAACAACTGGGAGCTTAGAGTTGTTTGAGGATCAGAAGAAGAAGAAGAAGAAGAGAGGAAGGCCAAGGAAGTATGATTCAAATAGGAACATGATTTTGACATCCCCTCCAAATGCAGTAACCTGGACAATGACAATGACAATGCCATTTTCATCACCACCACCAAAGCCCCATTCTGAATTTGGTGGATCGAATAATGAAGGGAAGTCTTCAGAAATTGAAATGGAAATCTTTGTGTCGATGAGAGTGACTCGATGTGGGGGTTTTGCAACTATTTCTGGTGGAGGCTTCACACCACATATGGTGAATGTTTTTGCTGGAGAGGATGTTGCTAGAAAGATCATGTCATTCTTCGAAAAGGGATTCTGGTCGAAGAGTGGTGACATGAGGACTGGTGGACTGAGTGTCGTGCTAGAAAGCTCTAGCAGCGACGTGTTTGGCGGCACAGTTGCCGGTCTGTTAACTGCTGCTAGCCCCGTTCAACTTGTGTTGGGGAGCTTCAGGCCACATGCTCCTAGAAGGAAGCGTGGCCGTGGAGAACACACTACAAGTCAGCTTGTTGTGGCTGCTCCTATTGCAGTCTGTCCAGACACAATGGCAGCAAGGAACCTTGCGTCGCAAGCAAATCCAGAACAAAGCCAGAGAGAGTTTGCTGCTGCTACTTGGAATGGTTCTGAAGAGTTTCCAGATCGGAGGATAACTCCAGATATCAACATATCATTGTCTGATGTCTAG 888 0.4662 MAETLNNSVSASMLSLSPPKQEQESAMMNMEVETSDAATPPTPQPPQPVAVATTGSLELFEDQKKKKKKRGRPRKYDSNRNMILTSPPNAVTWTMTMTMPFSSPPPKPHSEFGGSNNEGKSSEIEMEIFVSMRVTRCGGFATISGGGFTPHMVNVFAGEDVARKIMSFFEKGFWSKSGDMRTGGLSVVLESSSSDVFGGTVAGLLTAASPVQLVLGSFRPHAPRRKRGRGEHTTSQLVVAAPIAVCPDTMAARNLASQANPEQSQREFAAATWNGSEEFPDRRITPDINISLSDV 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181769g00002 295 SUPERFAMILY AF0104/ALDC/Ptd012-like 147 227 - -
Stsc181769g00002 295 MobiDBLite consensus disorder prediction 1 84 - -
Stsc181769g00002 295 MobiDBLite consensus disorder prediction 1 38 - -
Stsc181769g00002 295 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 29 172 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181769g00002 Stsc-Chr181769 16179 19447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181769g00002 13 285 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 28.704 2.00e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181769g00002 - - aip:107626418 184.111