Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181768g00001 ATGGCCAAAGGTGGAGGAAAACTAATGAAGCTCAAGTCAGTACTCAAGAAATGGAACTCATTCGGCACCAACACCACCAATAAACAGAGCCGTGGTGGCGCCACAGTGAGCGCCGTCGCCAACGACGAACAATCCTCGGTGTCAGGACCGGATTTCCGGGCGGTGTACGTGGGCAAGACGTGGCGCAGATACTGGGTGAGTCCGGACGTGGTGGAGCATCCGCTTTTCCGAGAGCTCGTGGATAGATCACGTGAGTCCTACGACGACAACAACTTGGCGGTGGTGGAGGAGGACACTGTCCACGTGGCATGCGAGGTGGTTCTGTTCGAGCACCTGATTTGGATGCTTGAAAACGCTGATCCTCAGCCTGACTCACTTGACGAGCTCGCCATTGCAGCATTGATGGCTAGTACAATTATATACTTCTGCATGGCAGTACGACCAAATTTTGATTGTGACTGCAATATAAAAGCTGTTATTGCTGTCATTTAG 492 0.5183 MAKGGGKLMKLKSVLKKWNSFGTNTTNKQSRGGATVSAVANDEQSSVSGPDFRAVYVGKTWRRYWVSPDVVEHPLFRELVDRSRESYDDNNLAVVEEDTVHVACEVVLFEHLIWMLENADPQPDSLDELAIAALMASTIIYFCMAVRPNFDCDCNIKAVIAVI 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181768g00001 163 Pfam Auxin responsive protein 13 116 IPR003676 GO:0009733
Stsc181768g00001 163 PANTHER EXPRESSED PROTEIN 33 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181768g00001 Stsc-Chr181768 4388 5128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181768g00001 4 118 Calmodulin-binding Proteins AT3G43120 25.714 4.87e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181768g00001 - - mtr:25486572 139.428