Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181757g00002 ATGGCGGTTCTGAACACTTTCTCTCTTTCGTTCTTCTTCTTCTTGGTCTTCCTCACTTTTGTTGCTTCCATTTCCACCGAGCCTCTTCCTCAACCTGCTGTTTCCTCCACTGATGTTGAACTCCTATTGTTCAAAATCAAGTCTTCACTGCAAGGCAACACCAATGGAGAAGAAAACCTCGTGTTATCTTCATGGAACTCTTCAGTTCCACTATGTCAATGGAGAGGCCTCAAATGGATCTTCTCCAATGGCACACCTTTGTCATGCACTGATCTCTCATCACCACAATGGAACAATCTCTCACTCCACAAAGACCCTTCTCTTCACTTACAATCCCTTCAGCTTCCTTCTGCAAATCTCTCAGGTTCTCTCCCCAGAGAGCTTGGTGAGTTTCCATTGCTTCAAAGCCTCTACCTTAACATTAACTCCTTGAAAGGAACCCTTCCTCTTGAAATCGGTTACAGCACTTCATTATCTGACATTGATTTTGGTGATAATCTTTTGACTGGCCAGATTCCAGCTTCTATTTGGAATCTTTGTGATAGGCTTGTTTCTCTTAGGCTTCACGGAAACTCCTTCTCTGGGAAGGTTCCAGAACCTGCATTGCCTAACTCTTCTTCTTGCAAGAGTCTTCAGTTTCTTGATTTGGGTGATAACAAATTCTCTGGGNNNNNNNNNNGTGGGTTGAAGCAGCTTGATTTAGGGAACAATATGTTTGTTGGTTCAATTCCTCAGAGCTTAGTTGGGCTAAAGCTTGAAAAGTTGAACCTTTCTCATAATAACTTGAGTGGGGTTTTGCCATTTTTTGGAGATAACAAATTTGGGGTTGATGTTTTTGAAGGGAATAGTCCTGACTTGTGTGGACCACCTTTGAGAGGCTGCACCAGAAACTCTGCACTGAGTTCTGGTGCAGTTGCTGGAATAGTTATTAGCCTTATGACTGGTGCGGTTGTTTTGGCTTCTTTGTTGATTGGATATATGCAGAACAAGAAGAGGAAGGGTACCGGAGAGAGTGAAGACGAGTTGAATGATGAAGAGGAAGATAATGAGAATGGTGGTGGTGTGGCTGGTGAGGGTGATGGTGGGGAAGGGAAGCTTATGATATTCGGCGGCGGCGAGAATTTGACATTGGATGATGTGTTGAATGCAACTGGGCAAGTTATGGAGAAGACATGTTATGGGACTGCTTATAAGGCAAAGCTTGCTGATGGGAGCTCCATTGCTTTGAGGTTGTTGAGGGAAGGTAGCTGCAAGGATAGGAACTCATGCTTGCCGGTTATAAAGCAGTTGGGGAAGATTCGACACGAGAATTTGATTCCTTTGAGAGCCTTCTATCAGGGGAAGCGAGGCGAGAAGCTCCTTATTTATGACTATTTGCCTCTTAGAACCCTTCATGAGCTTCTTCATGAAACTAAAGCAGGAAAACCAGTGCTAAATTGGGCTAGGCGACACAAGATTGCATTAGGAATTGCAAGAGGTCTGGCTTATCTTCACACAGGACTCGATGTGCCGATCACTCATGCGAATGTAAGATCCAAAAATGTGTTAGTGGACGACTTCTTTGTTGCGAGGCTCACCGACTTCGGCCTTGATAAGCTGATGGTTCCTTCCATAGCCGACGAAATGGTAGCACTCGCCAGGGCCGACGGCTACAAGGCTCCAGAGCTTCAAAAAATGAAGAAATGCAATTCCAGGACAGATGTTTATGCATTTGGGATACTGCTGCTGGAGATTTTGATTGGGAAGAAGCCAGGGAAACATGGAAGAAACGGAGAGTTCGTGGACTTGCCGGCGATGGTGAAGGTGGCGGTTTTGGAGGAGACTACAATGGAAGTGTTTGATGTGGAGCTCTTGAAAGGGATAAGAAGTCCAATGGAAGATGGTATGGTGCAGGCACTGAAGCTGGCGATGGGATGCTGCGCGCCGGTGGCAGCCGTTCGGCCAAGCATGGATGAAGTTGTGAGGCAGTTGGAGGAGAACAGACCAAGGAACAGATCTGCATTATACAGCCCTACAGAAACAAGGAGTGGAAGTGTTACCCCATTTTGA 2049 0.4549 MAVLNTFSLSFFFFLVFLTFVASISTEPLPQPAVSSTDVELLLFKIKSSLQGNTNGEENLVLSSWNSSVPLCQWRGLKWIFSNGTPLSCTDLSSPQWNNLSLHKDPSLHLQSLQLPSANLSGSLPRELGEFPLLQSLYLNINSLKGTLPLEIGYSTSLSDIDFGDNLLTGQIPASIWNLCDRLVSLRLHGNSFSGKVPEPALPNSSSCKSLQFLDLGDNKFSGXXXXGLKQLDLGNNMFVGSIPQSLVGLKLEKLNLSHNNLSGVLPFFGDNKFGVDVFEGNSPDLCGPPLRGCTRNSALSSGAVAGIVISLMTGAVVLASLLIGYMQNKKRKGTGESEDELNDEEEDNENGGGVAGEGDGGEGKLMIFGGGENLTLDDVLNATGQVMEKTCYGTAYKAKLADGSSIALRLLREGSCKDRNSCLPVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHELLHETKAGKPVLNWARRHKIALGIARGLAYLHTGLDVPITHANVRSKNVLVDDFFVARLTDFGLDKLMVPSIADEMVALARADGYKAPELQKMKKCNSRTDVYAFGILLLEILIGKKPGKHGRNGEFVDLPAMVKVAVLEETTMEVFDVELLKGIRSPMEDGMVQALKLAMGCCAPVAAVRPSMDEVVRQLEENRPRNRSALYSPTETRSGSVTPF 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181757g00002 682 MobiDBLite consensus disorder prediction 662 682 - -
Stsc181757g00002 682 Gene3D Ribonuclease Inhibitor 38 226 IPR032675 -
Stsc181757g00002 682 Gene3D Ribonuclease Inhibitor 227 298 IPR032675 -
Stsc181757g00002 682 ProSiteProfiles Protein kinase domain profile. 382 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181757g00002 682 Pfam Protein tyrosine and serine/threonine kinase 390 657 IPR001245 GO:0004672|GO:0006468
Stsc181757g00002 682 MobiDBLite consensus disorder prediction 333 367 - -
Stsc181757g00002 682 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 106 197 - -
Stsc181757g00002 682 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 661 IPR046959 -
Stsc181757g00002 682 MobiDBLite consensus disorder prediction 663 682 - -
Stsc181757g00002 682 Gene3D Transferase(Phosphotransferase) domain 1 461 670 - -
Stsc181757g00002 682 SUPERFAMILY L domain-like 73 268 - -
Stsc181757g00002 682 Gene3D Phosphorylase Kinase; domain 1 371 458 - -
Stsc181757g00002 682 SUPERFAMILY Protein kinase-like (PK-like) 391 658 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181757g00002 Stsc-Chr181757 6566 9781 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181757g00002 1 682 Receptor kinase-like Gene Family AT3G24660 69.521 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc181757g00002 PK_Tyr_Ser-Thr 1.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181757g00002 - - gmx:100814814 1052.35