Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181752g00002 ATGGTAAGCATCAAATCTATCCACACTGTCATCCCCAGTGAGGCTACCTCAAATGGAACTTTCTTGCTCTCTCAGAGTCAACAGATCAACGCTCATACTCATGCACTCACAATTTACATTTACAACTCAAATCATAACCACAACATAATTGATACAATGAAACACTCTCTTGCCAAGATCTTAGTCCATTACTACCCACTAGCTGGCCGCCTTCGCATGATGAAAGGCGGAAGAATGGAAGTTGAGTGCAACAGAAATGGTGTATTGCTGTTGGAAGCTGAATCCACCAATACACTCCAAGACTACGGTGATTTCGAGCCCAACGCCGCCTTGCGCCCGCTCCTCCCGGCGGTTGATTACAGTGAACCAATGGAAAGCCTGCCACTTGTTATGGTGCAGGTGACGAGATTTGCCTGCGGTGGAGTCTGTGTTGGGTTTGGAATCTCCAATGTCGTTGTGGATGGAATCTCTGGCACTCATTTCGTTGACGCTTGGGCTAAGCTTGCTCGAGGTGGAACTTTAGGAGAAGATGAGAAGCCATTGTTTCTTGATAAAATGGTGATTCGGAAATCTGAGATTAAAGCTGATGGGAAATTGTTTAGCGCGTCAAGTTTTGACCACCGTGAATTCAAGGTGCTTCCGATGATGATAGGTAGGTGTGATGCGAGTGAAGAAAGCAAGAAGGAGACAGATCTTGCAATTCTAAAGCTGACAAGGGAGATGGTGGAGAAGATAAAGAAGAAAGCCAGTGATGATGGATGCTTGGAATTTGATCACGAGGCAGTTACGGCGCAGAAGCATTGGCGACCCTATAGTAGGTACGAAAGCATAGCAGCTCATATATGGAGGTGTGCATGCAAGGCACGCAATGCAGATCACAACCAACCCACGGTGGTTCTCACTGTCGCCGGTATCCGTAACAGGCTAAAGCCACCTCTTCCTCTTAACTACTTTGGGAACGCCACACAACCAACTGTGACACCCACATGCCTCAGTGGCGACATTGCTTCAAAGCCACTAAGATATGGTGCCCAGAAGATGAGAGAAGCCATCGAGTTGCTGACAGATGAGTACCTGAGATCAGCCTTCGAATTCATTGGGAGGCAGGACAATTTAGGGTGTCTCAGGCCAAAGTTGAACGGTGAATCAGGGTGTGTTGACGCCCCATTTCTTGGGAACCCCAACCTCAACATTTGGAGTTGGATGAGTAATATGCCTACATATGGACCGGATTTTGGATGGGGAAGGCCGGTATACATGGGACCGTGTGAGGTTAAAGGAGATGGCAAGGCATTTATAATGCCTGCTCCCAGTGGAGATGGGACTCTTTCCGTTGCTATTCGGTTGCAGACTCCTCATGTTGAACCATTCGTCAAGTTCTTCTATCAGGACATATGA 1398 0.4742 MVSIKSIHTVIPSEATSNGTFLLSQSQQINAHTHALTIYIYNSNHNHNIIDTMKHSLAKILVHYYPLAGRLRMMKGGRMEVECNRNGVLLLEAESTNTLQDYGDFEPNAALRPLLPAVDYSEPMESLPLVMVQVTRFACGGVCVGFGISNVVVDGISGTHFVDAWAKLARGGTLGEDEKPLFLDKMVIRKSEIKADGKLFSASSFDHREFKVLPMMIGRCDASEESKKETDLAILKLTREMVEKIKKKASDDGCLEFDHEAVTAQKHWRPYSRYESIAAHIWRCACKARNADHNQPTVVLTVAGIRNRLKPPLPLNYFGNATQPTVTPTCLSGDIASKPLRYGAQKMREAIELLTDEYLRSAFEFIGRQDNLGCLRPKLNGESGCVDAPFLGNPNLNIWSWMSNMPTYGPDFGWGRPVYMGPCEVKGDGKAFIMPAPSGDGTLSVAIRLQTPHVEPFVKFFYQDI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181752g00002 465 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 439 - -
Stsc181752g00002 465 Gene3D - 1 211 IPR023213 -
Stsc181752g00002 465 Pfam Transferase family 1 462 - -
Stsc181752g00002 465 Gene3D - 219 464 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181752g00002 Stsc-Chr181752 8337 10946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181752g00002 2 463 Monolignol Biosynthesis Gene Families AT5G48930 35.776 9.61e-98 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181752g00002 K13065 - gmx:100779652 566.614